Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1591624	1591649	26	1 [0]	[0] 1	SAUSA300_RS07855	integrase

ATACAAAGACACTACAAAGACTATAAGTTCAAAAAGAAGTATCAGCATCAATTCTAGAACCGTAGAAATTTTTAAAAAGATAATACTGGAAAACAAAATG  >  NC_007793/1591524‑1591623                                                                                                    | ctACAAAGACACTACAAAGACTATAAGTTCAAAAAGAAGTATCAGCATCAATTCTAGAACCGTAGAAATTTTTAAAAAGATAATACTGGAAAACAAAATg  >  1:4979582/2‑100 (MQ=255)                                                                                                    | ATACAAAGACACTACAAAGACTATAAGTTCAAAAAGAAGTATCAGCATCAATTCTAGAACCGTAGAAATTTTTAAAAAGATAATACTGGAAAACAAAATG  >  NC_007793/1591524‑1591623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑