Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,624,971 (T)7→8 coding (1280/1335 nt) SAUSA300_RS13505 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,624,9641.T90.8% 239.3 / 14.8 87coding (1287/1335 nt)SAUSA300_RS13505hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/8);  new base T (0/79);  total (0/87)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGTCCTTCTCTTGTTACTTTTTCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCATTT  >  NC_007793/2624882‑2625057
                                                                                   |                                                                                                 
tgcccTTCTCTTGTTACTTTTTCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTg                                                                               <  1:2600744/97‑1 (MQ=255)
         ctTGTTACTTTTTCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGttt                                                                      <  1:5495472/100‑1 (MQ=255)
          ttGTTACTTTTTCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGtttt                                                                     <  1:5008900/100‑1 (MQ=255)
                 cgatcttGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGgcggg                                                              <  1:3564506/94‑3 (MQ=21)
                 cgatcttGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGgcgga                                                              <  1:5082945/94‑3 (MQ=21)
                  ttttCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTc                                                            <  1:2823110/100‑1 (MQ=255)
                     tCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCGTcga                                                          <  1:3652748/100‑3 (MQ=21)
                      cTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTgg                                                         <  1:4254564/100‑1 (MQ=255)
                      cTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTgg                                                         <  1:2837553/100‑1 (MQ=255)
                        gTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACTTTTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGgt                                                        <  1:1926736/100‑1 (MQ=255)
                        gTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTCGGCGCTTCTGgtc                                                       <  1:811497/100‑2 (MQ=255)
                         tCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTggata                                                      <  1:231437/100‑4 (MQ=255)
                         tCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGgtgt                                                      <  1:4068325/100‑1 (MQ=255)
                         tCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGgggt                                                      <  1:2900731/100‑1 (MQ=255)
                         gatcTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGgtgt                                                      <  1:1253881/97‑1 (MQ=255)
                          ccccGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:602416/100‑1 (MQ=255)
                          cccTGGTGCTAAATCCGGATTAAATTTCCGTTATTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:4271414/100‑1 (MQ=25)
                          cccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGGATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:4765087/100‑1 (MQ=255)
                          cccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGgtgtg                                                     <  1:151527/100‑2 (MQ=255)
                          cccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:3232337/100‑1 (MQ=255)
                          cccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:5792193/100‑1 (MQ=255)
                          cccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTa                                                     <  1:799530/100‑1 (MQ=255)
                           ccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTag                                                    <  1:356127/100‑2 (MQ=255)
                           ccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTaa                                                    <  1:3253303/100‑1 (MQ=255)
                           ccTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTaa                                                    <  1:4106773/100‑1 (MQ=255)
                            cTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTaaa                                                   <  1:2154821/100‑1 (MQ=255)
                                       ttccgatctaaTTTGCGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTg                                        <  1:676370/91‑1 (MQ=38)
                                         cGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTgct                                      <  1:1212531/100‑3 (MQ=255)
                                              tAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCttt                                 <  1:3659872/100‑1 (MQ=255)
                                                gatctACGTGCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCa                               <  1:1689373/96‑1 (MQ=255)
                                                aaTTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCa                               <  1:4926303/100‑1 (MQ=255)
                                                aaTTTACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCa                               <  1:1773839/100‑1 (MQ=255)
                                                    tACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTc                           <  1:3873535/100‑1 (MQ=255)
                                                    tACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTc                           <  1:1765019/100‑1 (MQ=255)
                                                    tACGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTc                           <  1:2875127/100‑1 (MQ=255)
                                                    ctcGTTCATTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTc                           <  1:1711969/98‑1 (MQ=255)
                                                      cGTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAg                         <  1:2652213/100‑1 (MQ=255)
                                                       gTTCTTTCTTGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCagcacacg                        <  1:1356979/100‑8 (MQ=255)
                                                           tttcttGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTtctc                    <  1:1931133/100‑1 (MQ=255)
                                                             tcttGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCAt                  <  1:4165706/100‑1 (MQ=255)
                                                               ttGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATcc                <  1:4490044/100‑1 (MQ=255)
                                                               ttGAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATcc                <  1:5787662/100‑1 (MQ=255)
                                                                 gAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAg              <  1:4705801/100‑1 (MQ=255)
                                                                 gAATGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAg              <  1:3702146/100‑1 (MQ=255)
                                                                  cttccgaTCTCTTCTACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAga             <  1:907355/94‑2 (MQ=255)
                                                                  aaTGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAgt             <  1:152666/100‑2 (MQ=255)
                                                                  aaTGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGc             <  1:4333865/100‑1 (MQ=255)
                                                                   ttccgaTCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGcc            <  1:5381684/95‑1 (MQ=255)
                                                                   aTGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGcc            <  1:1393680/100‑1 (MQ=255)
                                                                   aTGGAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGcc            <  1:4148900/100‑1 (MQ=255)
                                                                    tGGAATCTCTTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:2727915/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:3223093/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:5500971/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:2527025/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:3642293/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAt          <  1:3383643/100‑1 (MQ=255)
                                                                     ggAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGGAAACTCTGAACCTTTCAAGTCAGTTCTCAGCCAGCCAt          <  1:5100195/100‑1 (MQ=255)
                                                                      tccgatctTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAttt        <  1:4763256/95‑1 (MQ=255)
                                                                      gAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGTCGCTTCTGGTGTAAAAGTAAACTCTGATCCTTTCAAGTCAGTTCTCATCCAGCCAtt         <  1:5506147/100‑1 (MQ=255)
                                                                      gAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtt         <  1:1569049/100‑1 (MQ=255)
                                                                      gAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtt         <  1:1322644/100‑1 (MQ=255)
                                                                      gAATCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAta         <  1:3020303/100‑2 (MQ=255)
                                                                      gAATCTCTTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtgt        <  1:3479177/100‑3 (MQ=255)
                                                                       gaTCTCTTCACC‑‑TTT‑T‑TTCTCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGATCCATTCAAGTCAATTCTCATCCAGCCAtta        <  1:1567540/99‑2 (MQ=255)
                                                                       gaTCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAttt        <  1:5001317/99‑1 (MQ=255)
                                                                       aaTCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtta        <  1:2438916/100‑2 (MQ=255)
                                                                       aaTCTCTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtta        <  1:3003598/100‑2 (MQ=255)
                                                                       aaTCTCTTCAAC‑‑TTT‑TATT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCAtag        <  1:5029191/100‑3 (MQ=255)
                                                                       aaTCTCTGCAAC‑‑TTTCC‑TT‑TCTAATTCTGTGATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACCCGGAACCTTTCAAGTCAGTTCTCATCCAGCCAtta        <  1:842534/100‑2 (MQ=255)
                                                                         tctcTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAGCCTTTCAAGTCAGTTCTCATCCAGCCATTTGc      <  1:959080/100‑1 (MQ=255)
                                                                         tctcTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAGGTCAGTTCTCATCCAGCCATTTGc      <  1:2426364/100‑1 (MQ=255)
                                                                         tctcTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTgt      <  1:3117308/100‑2 (MQ=255)
                                                                         tctcTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGc      <  1:4255236/100‑1 (MQ=255)
                                                                         tctcTTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGc      <  1:3328280/100‑1 (MQ=255)
                                                                          ctctTCAACTTTTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGc      <  1:4335566/100‑1 (MQ=255)
                                                                          ctctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCa     <  1:5073791/100‑1 (MQ=255)
                                                                          ctctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCa     <  1:4269903/100‑1 (MQ=255)
                                                                          ctctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCa     <  1:2041178/100‑1 (MQ=255)
                                                                           tctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAt    <  1:3527817/100‑1 (MQ=255)
                                                                           tctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAt    <  1:2204451/100‑1 (MQ=255)
                                                                            ctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAtt   <  1:97848/100‑1 (MQ=255)
                                                                            ctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAtt   <  1:1455097/100‑1 (MQ=255)
                                                                            ctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAtg   <  1:1433920/100‑2 (MQ=255)
                                                                            ctTCAACT‑TTT‑T‑TT‑TCTAATTCTGTAATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAtt   <  1:2950/100‑1 (MQ=255)
                                                                            ctTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAttt  <  1:4375633/100‑1 (MQ=255)
                                                                             ttCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAttt  <  1:4242040/100‑1 (MQ=255)
                                                                             ttCAACT‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCAttt  <  1:4110046/100‑1 (MQ=255)
                                                                                   |                                                                                                 
TGTCCTTCTCTTGTTACTTTTTCTGTCCCTGGTGCTAAATCCGGATTAAATTTACGTTCTTTCTTGAATGGAATCTCTTCAAC‑‑TTT‑T‑TT‑TCTAATTCTGTTATTGTTTTTGGCGCTTCTGGTGTAAAAGTAAACTCTGAACCTTTCAAGTCAGTTCTCATCCAGCCATTTGCATTT  >  NC_007793/2624882‑2625057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑