D66 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,000,985	(C)_5→6	noncoding (1/76 nt)	SAUSA300_RS10045 ←	tRNA‑Ala

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,000,980	1	.	C	81.4%	218.6 / 72.5	113	noncoding (6/76 nt)	SAUSA300_RS10045	tRNA‑Ala
Reads supporting (aligned to +/- strand): ref base . (0/21); new base C (0/92); total (0/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

Only 100 of 118 total aligned reads displayed.

ATCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCTAT  >  NC_007793/2000886‑2001074

 tCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑c‑cccct                                                                                          <  1:1871780/100‑2 (MQ=255)

  ctggTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCag                                                                                         <  1:2245910/97‑2 (MQ=255)

  cTAGTTTCCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑c‑ccccgg                                                                                         <  1:2682322/100‑3 (MQ=255)

   tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaa                                                                                        <  1:25540/100‑1 (MQ=255)

   tAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCatc                                                                                        <  1:3893024/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:5107686/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:2385632/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:298304/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:4556755/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:1511622/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:1587122/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:3556822/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:1591841/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:1085609/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:215532/100‑3 (MQ=255)

     gTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:4927615/100‑3 (MQ=255)

     gTTTCCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAT‑G‑C‑CCCCcaaat                                                                                      <  1:4226558/100‑3 (MQ=17)

     gTTATCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCcaaat                                                                                      <  1:1160180/100‑3 (MQ=255)

      ttttCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑c‑cccccctcag                                                                                     <  1:702424/100‑7 (MQ=255)

        ttCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAgg                                                                                    <  1:4546534/100‑1 (MQ=255)

        ttCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCAAATAGGt                                                                                   <  1:3565960/100‑1 (MQ=255)

        ttCAAGGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑CGCCCCAAATAgg                                                                                    <  1:5796366/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAggc                                                                                   <  1:5459433/100‑2 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:4492689/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:5186722/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:3002287/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:177934/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:1701482/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:3570726/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:270471/100‑1 (MQ=255)

         tCAATGTACAAATAATGGTGGAGACTAACGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGt                                                                                   <  1:814544/100‑1 (MQ=255)

          cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAggca                                                                                  <  1:1640334/100‑3 (MQ=255)

          cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGtg                                                                                  <  1:5673683/100‑2 (MQ=255)

          cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTa                                                                                  <  1:128055/100‑1 (MQ=255)

          cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTa                                                                                  <  1:1742358/100‑1 (MQ=255)

          cAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTa                                                                                  <  1:1327271/100‑1 (MQ=255)

           aaTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTat                                                                                 <  1:872647/100‑1 (MQ=255)

           aaTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTat                                                                                 <  1:2028407/100‑1 (MQ=255)

           aaTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTat                                                                                 <  1:1964897/100‑1 (MQ=255)

            aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatt                                                                                <  1:298243/100‑1 (MQ=255)

            aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatt                                                                                <  1:2023759/100‑1 (MQ=255)

            aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatt                                                                                <  1:4136070/100‑1 (MQ=255)

            aTGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatt                                                                                <  1:1329931/100‑1 (MQ=255)

             tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatta                                                                               <  1:2299612/100‑1 (MQ=255)

             tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatta                                                                               <  1:5267440/100‑1 (MQ=255)

             tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatta                                                                               <  1:5472949/100‑1 (MQ=255)

             tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatta                                                                               <  1:4050536/100‑1 (MQ=255)

             tGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTatca                                                                               <  1:339108/100‑3 (MQ=255)

                           tggAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGc                                                                 <  1:5172190/100‑1 (MQ=255)

                             gagaCTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCt                                                               <  1:1589297/100‑1 (MQ=255)

                               gaCTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTaa                                                             <  1:4711725/100‑1 (MQ=255)

                                        gATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACtag                                                    <  1:1033868/100‑3 (MQ=255)

                                          tCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGat                                                  <  1:4172998/100‑2 (MQ=255)

                                              aCCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAaccac                                              <  1:4151060/100‑1 (MQ=255)

                                                       ctcctGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCAc                                     <  1:4619447/100‑1 (MQ=255)

                                                           tGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCtt                                 <  1:272961/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:3599456/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:1435364/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:411416/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:1165466/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:5567795/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:1748197/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:1760846/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:1994585/100‑1 (MQ=255)

                                                              gTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATc                              <  1:4598952/100‑1 (MQ=255)

                                                                               tcCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAGcc             <  1:4010006/100‑1 (MQ=255)

                                                                               tcCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc             <  1:5648523/100‑1 (MQ=255)

                                                                               tcCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc             <  1:1790243/100‑1 (MQ=255)

                                                                               tcCCAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc             <  1:1008825/100‑1 (MQ=255)

                                                                               ccgatctgtggCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAAcc             <  1:4437089/90‑1 (MQ=17)

                                                                                 gatctgaggCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAg           <  1:3631436/92‑1 (MQ=17)

                                                                                 ccAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAg           <  1:2993221/100‑1 (MQ=255)

                                                                                  cAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAgt          <  1:446854/100‑2 (MQ=255)

                                                                                  cAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAgg          <  1:4923830/100‑2 (MQ=255)

                                                                                  cAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGc          <  1:3911241/100‑1 (MQ=255)

                                                                                  cAGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGc          <  1:4853774/100‑1 (MQ=255)

                                                                                   atcTGACCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGcg         <  1:797597/98‑2 (MQ=17)

                                                                                   aGCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCt         <  1:2591135/100‑1 (MQ=255)

                                                                                    tccgatcTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:4405535/94‑1 (MQ=17)

                                                                                    tcTGAGTTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:1331274/99‑1 (MQ=255)

                                                                                    gCTGAGCTAAGG‑C‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCGCGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:5736292/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:107633/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:1989375/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:5208340/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:872107/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:5342892/100‑1 (MQ=255)

                                                                                    gCTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:3149530/100‑1 (MQ=255)

                                                                                    ctgtggCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTg        <  1:3808161/95‑1 (MQ=17)

                                                                                     ttgtccTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCGCACGCTTATCAGGCGTGCGCTCTAACCAGCTGa       <  1:4217659/95‑1 (MQ=17)

                                                                                     cTGAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGa       <  1:487816/100‑1 (MQ=255)

                                                                                       gAGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGaat     <  1:309685/100‑3 (MQ=255)

                                                                                        aGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCt    <  1:5586037/100‑1 (MQ=255)

                                                                                        aGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCt    <  1:5787310/100‑1 (MQ=255)

                                                                                        aGCTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCt    <  1:2388091/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtat  <  1:3552874/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtat  <  1:4066666/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtat  <  1:5736756/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtat  <  1:574049/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtat  <  1:449984/100‑1 (MQ=255)

                                                                                          cTAA‑GCC‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCtag  <  1:2649760/100‑2 (MQ=255)

ATCTAGTTTTCAATGTACAAATAATGGTGGAGACTAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTAA‑G‑C‑CCCCAAATAGGTATTAAATTAATGGTGGGCCTAAGTGGACTCGAACCACCGACCTCACGCTTATCAGGCGTGCGCTCTAACCAGCTGAGCTAT  >  NC_007793/2000886‑2001074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`