Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 593,859 Δ1 bp coding (27/472 nt) SAUSA300_RS02840 → 30S ribosomal protein S7

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007793593,8590T.99.9% 20447.2 / 3.7 5144coding (27/472 nt)SAUSA300_RS0284030S ribosomal protein S7
Reads supporting (aligned to +/- strand):  ref base T (4/0);  major base . (5114/20);  minor base G (5/0);  total (5124/20)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01

Only 100 of 5149 total aligned reads displayed.

CTAAGAATTTAGTTTTTAATTAAATCTTAAACTTAAAATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAATAAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACAAAGAAT  >  NC_007793/593764‑593958
                                                                                               |                                                                                                   
                           taaacttaaaATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                     >  1:3592141/1‑100 (MQ=255)
                           taaacttaaaATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAAct                                                                     >  1:498469/1‑100 (MQ=255)
                                       atTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTaa                                                         >  1:5640011/1‑100 (MQ=255)
                                         ttAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACt                                                       >  1:67572/1‑100 (MQ=255)
                                          tAATATAAGGAAGGGAGGATTTACATTATGCCTCGGAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATTCAATTCATAACTCTAAGTTAGTAACTa                                                      >  1:3646375/1‑100 (MQ=255)
                                          gcatatAAGGAAGGGAGGTTTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTa                                                      >  1:1261809/3‑100 (MQ=255)
                                           aaTATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTCTTACCAGATCCAATTCATAACTCTAAGTTAGTAACTaa                                                     >  1:3939317/1‑100 (MQ=255)
                                           aaTATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTaa                                                     >  1:519121/1‑100 (MQ=255)
                                             tttaAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaat                                                   >  1:1875216/3‑100 (MQ=255)
                                             caaaaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaat                                                   >  1:1469424/4‑100 (MQ=255)
                                             attaAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaat                                                   >  1:1835686/3‑100 (MQ=255)
                                              ccaaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatt                                                  >  1:2988132/3‑100 (MQ=255)
                                               tggggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:1413739/4‑100 (MQ=255)
                                               taAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:2505135/1‑100 (MQ=255)
                                               taAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:325349/1‑100 (MQ=255)
                                               taAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:4578972/1‑100 (MQ=255)
                                               gtgggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:3295291/4‑100 (MQ=255)
                                               caaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:3396952/2‑100 (MQ=255)
                                               caaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaatta                                                 >  1:5793614/2‑100 (MQ=255)
                                                gtgtgaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:2401630/6‑100 (MQ=255)
                                                caggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:5250677/2‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACTTAA‑AAGAGACGTATTACCAGATTCATTTCATAACTCTAAGCTAGTAACTAaattaa                                                >  1:3532969/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:1111774/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:4494789/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:3348243/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:4100103/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:2766769/1‑100 (MQ=255)
                                                aaggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaa                                                >  1:3794243/1‑100 (MQ=255)
                                                 ctgcaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaat                                               >  1:4541569/5‑100 (MQ=255)
                                                  ggaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaatt                                              >  1:3890347/1‑100 (MQ=255)
                                                  gctaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaatt                                              >  1:4452560/4‑100 (MQ=255)
                                                  cgaaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAaattaatt                                              >  1:4045105/2‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                            >  1:4938642/1‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                            >  1:2238912/1‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                            >  1:5416467/1‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                            >  1:2204324/1‑100 (MQ=255)
                                                    aaggGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAAttaattaa                                            >  1:4399305/1‑100 (MQ=255)
                                                       ccaggaTTTACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACaa                                         >  1:2343858/3‑100 (MQ=255)
                                                              ttACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATg                                  >  1:3130624/1‑100 (MQ=255)
                                                               tACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGt                                 >  1:4679889/1‑100 (MQ=255)
                                                               tACATTATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGt                                 >  1:2818959/1‑100 (MQ=255)
                                                                  tgtATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAg                              >  1:2546140/3‑100 (MQ=255)
                                                                   ccttGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGa                             >  1:2100453/4‑100 (MQ=255)
                                                                   atATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAgg                             >  1:1630032/2‑99 (MQ=255)
                                                                    tctGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                            >  1:1060235/3‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAggt                            >  1:3844853/1‑98 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGaa                            >  1:2146573/1‑99 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                            >  1:3032569/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                            >  1:483672/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAt                            >  1:773323/1‑100 (MQ=255)
                                                                    tATGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGCTAGAt                            >  1:2586292/1‑100 (MQ=255)
                                                                     ttGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGacg                           >  1:3459232/2‑98 (MQ=255)
                                                                     aTGCCTTGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGacg                           >  1:1000501/1‑98 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATACCTCTAAGTTAGTAACTAAGTTAATTACCAAAATTATGTTAGATg                           >  1:229247/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGacg                           >  1:1742083/1‑98 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGAta                           >  1:615890/1‑99 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:1159075/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:1369413/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:5095597/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:830725/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:1685972/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:2934434/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:4251719/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:4309338/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:4353380/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:935652/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGAAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:3081941/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCAAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:3747794/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCTA‑‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgg                          >  1:5146405/1‑100 (MQ=255)
                                                                     aTGCCTCGTAAAGGATCAGTACCT‑AGAATAGACGTATTACCAGATCCAATTCATAGCTCTAATTTAGTAACTAAATTAATTAACAAAATTATGTTAGATg                           >  1:3986278/1‑100 (MQ=255)
                                                                      tGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgg                          >  1:4728848/1‑100 (MQ=255)
                                                                      tGCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGCTAGTAACTAAATTAATTAACAAAATTATGTTAGATgg                          >  1:1316216/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATggc                         >  1:888030/1‑99 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATgga                         >  1:5742987/1‑99 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGt                         >  1:1782045/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGt                         >  1:4150511/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGt                         >  1:5042755/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGt                         >  1:4629962/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGt                         >  1:5530253/1‑100 (MQ=255)
                                                                       gCCTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGt                         >  1:5472353/1‑100 (MQ=255)
                                                                        ccTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTa                        >  1:1922933/1‑100 (MQ=255)
                                                                        ccTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTa                        >  1:245779/1‑100 (MQ=255)
                                                                         cTCGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTGTGTTAGATGGTaa                       >  1:5366313/1‑100 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTaaga                     >  1:3691558/1‑98 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAAc                     >  1:724362/1‑100 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGTaaga                     >  1:4776116/1‑98 (MQ=255)
                                                                           cGTAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGACGGTAAAc                     >  1:5692471/1‑100 (MQ=255)
                                                                             tAAAGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGt                   >  1:4880966/1‑100 (MQ=255)
                                                                              caaGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTg                  >  1:5573553/2‑100 (MQ=255)
                                                                               aaGGATCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATggagatcggaa                 >  1:1576685/1‑91 (MQ=255)
                                                                                 ataTCAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGaa               >  1:1219151/3‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc           >  1:3182006/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc           >  1:2872754/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc           >  1:2645543/1‑100 (MQ=255)
                                                                                     cAGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc           >  1:1524567/1‑100 (MQ=255)
                                                                                     aaGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGc           >  1:5311982/2‑100 (MQ=255)
                                                                                      aGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGca          >  1:2043517/1‑100 (MQ=255)
                                                                                      aGTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTAGatcggaa          >  1:4205671/1‑94 (MQ=255)
                                                                                       gTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGcac         >  1:2698423/1‑100 (MQ=255)
                                                                                       gTACCTAA‑AAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGcac         >  1:1980861/1‑100 (MQ=255)
                                                                                               |                                                                                                   
CTAAGAATTTAGTTTTTAATTAAATCTTAAACTTAAAATATTTAATATAAGGAAGGGAGGATTTACATTATGCCTCGTAAAGGATCAGTACCTAATAAGAGACGTATTACCAGATCCAATTCATAACTCTAAGTTAGTAACTAAATTAATTAACAAAATTATGTTAGATGGTAAACGTGGAACAGCACAAAGAAT  >  NC_007793/593764‑593958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑