| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | NC_007792 | 1,916 | Δ22,120 bp | between repeat_region | SAUSA300_RS14750–SAUSA300_RS14855 | 22 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, SAUSA300_RS14850, SAUSA300_RS14855 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007792 | 1907 | 23870 | 21964 | 1 [0] | [0] 6 | SAUSA300_RS14750–[SAUSA300_RS14855] | 22 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, SAUSA300_RS14850, [SAUSA300_RS14855] |
ATACACTCAAAGGCATTGAATGTATTTACGCTCTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGATTTTCGCCATGCCACGAAATTAGCATCATGCTAGCAAG > NC_007792/23861‑23969 | taaaatacacaGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGGTTTTCGCCATGCCGTGTAATTAGcatcat < 1:628894/90‑1 (MQ=11) cacaGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTGCGGGTTTTCGCCATGCCGTGTAATTAGCATCATGCTAGct < 1:2827924/97‑2 (MQ=11) cacaGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGGTTTTCGCCATGCCGTGTAATTAGCATCATGCTAGct < 1:6422292/97‑2 (MQ=11) acaGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGGTTTTCGCCATGCCGTGTAATTAGCATCATGCTAGcta > 1:4158753/3‑98 (MQ=11) caGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGGTTTTCGCCATGCCGTGTAATTAGCATCATGctagctag > 1:2188301/2‑100 (MQ=11) caGGCATTGAATGTATTTATGAACTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGGTTTTCGCCATGCCGTGTAATTAGCATCATGctagctag > 1:2626746/2‑100 (MQ=11) | ATACACTCAAAGGCATTGAATGTATTTACGCTCTATATAAAAAGAACCGCAGATCTCTTCAGATCTACGGATTTTCGCCATGCCACGAAATTAGCATCATGCTAGCAAG > NC_007792/23861‑23969 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |