Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007790	918	A→G	T213T (ACA→ACG)	SAUSA300_RS14705 →	replication protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007790	918	0	A	G	95.0%	202.8 / ‑1.4	81	T213T (ACA→ACG)	SAUSA300_RS14705	replication protein
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base G (75/1);  total (80/1)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAGATGGTAATTTGATTAATGCAAGTGATGAAGATAAAAC‑A‑ACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGT  >  NC_007790/821‑1009                                                                                                   |                                                                                             tAAGTTATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAtac‑g‑ac                                                                                           <  1:5905758/100‑1 (MQ=255) tAAGTTATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac‑g‑ac                                                                                           >  1:2686702/1‑100 (MQ=255)    cttATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑CCAGa                                                                                        >  1:705894/2‑100 (MQ=255)     gtATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAGC‑G‑ACAGat                                                                                       >  1:2344306/2‑99 (MQ=255)     gtATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑A‑ACAGat                                                                                       >  1:1300256/2‑99 (MQ=255)     ctATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGat                                                                                       >  1:1442539/2‑99 (MQ=255)     ccctggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGAc                                                                                       >  1:2718592/4‑100 (MQ=255)     atATGGTGGATTGCTTAAACAAAAGCATAAAATTTTGAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGGC‑G‑ACAGat                                                                                       >  1:671447/2‑99 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGGCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATAC‑G‑ACAGatc                                                                                      >  1:2189782/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac‑g‑accagat                                                                                      >  1:201705/1‑95 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGTC‑G‑ACAGatc                                                                                      >  1:4410196/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGAC‑G‑ACAGatc                                                                                      >  1:3103065/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGAC‑G‑ACAGatc                                                                                      >  1:1551753/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAc‑agacagat                                                                                       >  1:847259/1‑99 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑GCAGatc                                                                                      >  1:3817255/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatc                                                                                      >  1:4456548/1‑98 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACg                                                                                      >  1:4034540/1‑100 (MQ=255)      tATGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑C‑ATAGatc                                                                                      >  1:63009/1‑98 (MQ=255)      caTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGAAATTTGATTAATACAAGTGATGAAGATAAAGC‑G‑ACAGatc                                                                                      >  1:5404139/2‑98 (MQ=255)       ttggtggATTGCTTAAACAAAAGCATAAAATTTTGAACTTAGACGATGCCGAAGCTGGTAATTTGATTAATACAAGTGATGAAGATAAAACGA‑ACAGatc                                                                                      >  1:3945596/2‑98 (MQ=255)       ttggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTTGACGATGCCGAAGGTGGAAATTTGATTAATACAAGTGATGAAGATAAGAC‑A‑ACAGatcg                                                                                     >  1:2070573/2‑97 (MQ=255)       ctggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac‑a‑acgagatc                                                                                     >  1:1094588/2‑94 (MQ=255)       ctggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcg                                                                                     >  1:4380601/2‑97 (MQ=255)       ctggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑A‑ACAGatcg                                                                                     >  1:3829170/2‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGGCGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACga                                                                                     >  1:4987668/1‑100 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGCTGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAGC‑G‑ACAGatcg                                                                                     >  1:2143505/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac‑g‑actagatc                                                                                     >  1:1747073/1‑94 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAaac‑g‑acgagatc                                                                                     >  1:3997144/1‑94 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATAC‑G‑ACAGatcg                                                                                     >  1:5146880/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAGC‑G‑ACAGatcg                                                                                     >  1:1800831/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑TCAGatcg                                                                                     >  1:3820596/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑CCAGatcg                                                                                     >  1:4535430/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACGGACga                                                                                     >  1:1687717/1‑100 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcg                                                                                     >  1:2278091/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcg                                                                                     >  1:3610382/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcg                                                                                     >  1:3754487/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcg                                                                                     >  1:5511743/1‑97 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACga                                                                                     >  1:733454/1‑100 (MQ=255)       aTGGTGGATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAA‑G‑ACAGatcg                                                                                     >  1:5436643/1‑97 (MQ=255)        tggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAGAC‑G‑ACAGatcgg                                                                                    >  1:3102673/1‑96 (MQ=255)        atgtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAATC‑G‑ACAGatcgg                                                                                    >  1:4365513/3‑96 (MQ=255)        aggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcgg                                                                                    >  1:2123252/2‑96 (MQ=255)         ggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAT‑G‑ACAGatcgga                                                                                   >  1:5364243/1‑95 (MQ=255)         ggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGatcgga                                                                                   >  1:2698508/1‑95 (MQ=255)         ggtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACgaag                                                                                   >  1:4031510/1‑100 (MQ=255)         cgtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATAC‑G‑ACAGatcgga                                                                                   >  1:1069355/2‑95 (MQ=255)         cgtggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑CCAGatcgga                                                                                   >  1:2894451/2‑95 (MQ=255)         aggggATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑CCAGatcgga                                                                                   >  1:507667/4‑95 (MQ=255)            agATTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAACGA‑ACAGatcggaag                                                                                 >  1:289684/2‑93 (MQ=255)             taTTGCTTAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAATAC‑G‑ACAGatcggaagag                                                                               >  1:1371052/2‑91 (MQ=255)                  tatAAACAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGc                                                                         >  1:4213034/3‑100 (MQ=255)                     aaaCAAAAGCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGcaca                                                                      >  1:5726049/1‑100 (MQ=255)                         aaaagCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCa                                                                  >  1:4128301/1‑100 (MQ=255)                          aaagCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCaa                                                                 >  1:5459209/1‑100 (MQ=255)                          aaagCATAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCaa                                                                 >  1:2335006/1‑100 (MQ=255)                               ttAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTAcc                                                            >  1:4439534/2‑100 (MQ=255)                               ctAAAATTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTAcc                                                            >  1:6019930/2‑100 (MQ=255)                                 aaaaTTTTAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGc                                                          >  1:2752328/1‑100 (MQ=255)                                      tttAAACTTAGACGATGCCGAAGATGGTAATTTGATTAATACAAGGGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAtct                                                     >  1:618475/1‑98 (MQ=255)                                            actAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaaag                                               >  1:2738058/3‑98 (MQ=255)                                             ctAGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAAtag                                              >  1:676444/2‑98 (MQ=255)                                               ggACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAAtagat                                            >  1:2874848/2‑96 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGGTAAAAC‑G‑ACAGACGAAGAA‑AAGAAGCACATTCAATTACCGCAATATGGaagatcg                                            >  1:1979329/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAttggaagatcgg                                            >  1:2147245/1‑90 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAttggaagatcgg                                            >  1:30534/1‑90 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTgagatcgga                                            >  1:3168009/1‑92 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGagatcgg                                            >  1:3447717/1‑94 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaagatcg                                            >  1:3472042/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaaagatc                                            >  1:1959232/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTAGGaagatcg                                            >  1:1922289/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTAGGaagatcg                                            >  1:5968018/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATATGGaagatcg                                            >  1:1678343/1‑95 (MQ=255)                                               aGACGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAACTTGGaagatcg                                            >  1:5286488/1‑95 (MQ=255)                                                 atgATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGaaagatcgga                                          >  1:4799340/3‑93 (MQ=255)                                                 aCGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAGTTGGaagatcgga                                          >  1:867743/1‑93 (MQ=255)                                                  cGATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaagatcggaa                                         >  1:3780766/1‑92 (MQ=255)                                                  ataTGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATATGGaagatcggaa                                         >  1:1015489/3‑92 (MQ=255)                                                   taTGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaagatcggaag                                        >  1:4238912/2‑91 (MQ=255)                                                   gATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaagatcggaag                                        >  1:204461/1‑91 (MQ=255)                                                   gATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGaaaa                                        >  1:2952361/1‑100 (MQ=255)                                                   gATGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAGTCGGaagatcggaag                                        >  1:2995163/1‑91 (MQ=255)                                                    ctgccGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAg                                       >  1:1017223/5‑100 (MQ=255)                                                    aTGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGaagatcggaaga                                       >  1:4616911/1‑90 (MQ=255)                                                    aTGCCGAAGATGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAAGTTGGaagatcggaaga                                       >  1:3266017/1‑90 (MQ=255)                                                          aaGATTGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAAGATCGaaagcacacgt                                 >  1:1476096/1‑92 (MQ=255)                                                            tgtGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGA‑‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCaaagatcg                              >  1:3091190/3‑95 (MQ=255)                                                             ttGGTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCaaagatcg                              >  1:708553/2‑95 (MQ=255)                                                               ggTAATTTGATTAATACAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCaaaagatcgg                            >  1:4268797/1‑94 (MQ=255)                                                                               cAAGTGATGAAGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAgatc            >  1:1840331/1‑97 (MQ=255)                                                                                         aGATAAAAC‑G‑ACAGACGAAGAA‑AAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGATAACtgggcc  <  1:1888458/100‑6 (MQ=255)                                                                                                   |                                                                                             TAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAGATGGTAATTTGATTAATGCAAGTGATGAAGATAAAAC‑A‑ACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGT  >  NC_007790/821‑1009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑