D37 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,692,192	T→A	L252L (CTA→CTT)	SAUSA300_RS08405 ←	HrcA family transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,692,192	0	T	A	100.0%	588.9 / NA	176	L252L (CTA→CTT)	SAUSA300_RS08405	HrcA family transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (9/167); total (9/167)

Only 100 of 178 total aligned reads displayed.

AAGCTGTCATCAATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGTAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTACTTTGATTAGA  >  NC_007793/1692097‑1692284

aaGCTGTCATCAATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTgaagaa                                                                                          >  1:4150166/1‑100 (MQ=255)

     gTCATCAATTTCATTACCAATTTTTACATTAATATTTGGGGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGc                                                                                     >  1:4689297/1‑100 (MQ=255)

      tcatcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCt                                                                                    <  1:3982128/100‑1 (MQ=255)

      tcatcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCt                                                                                    <  1:5196111/100‑1 (MQ=255)

      tcatcaATTTCATTACCAA‑TTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTg                                                                                   <  1:5919948/100‑1 (MQ=255)

       catcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCtt                                                                                   <  1:5403836/100‑2 (MQ=255)

       catcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCta                                                                                   <  1:5176778/100‑2 (MQ=255)

        atcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGa                                                                                  <  1:2515999/100‑1 (MQ=255)

        atcaATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGa                                                                                  <  1:3115631/100‑1 (MQ=255)

                           tttACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACAtgccatg                                                               <  1:2528476/100‑7 (MQ=255)

                                     tatTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGc                                                     <  1:4658188/100‑1 (MQ=255)

                                      atTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCa                                                    <  1:669964/100‑1 (MQ=255)

                                       tttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCac                                                   <  1:2608829/100‑2 (MQ=255)

                                       tttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCAt                                                   <  1:2335643/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGcctg                                                  <  1:2459361/100‑4 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATc                                                  <  1:5640137/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATc                                                  <  1:2303822/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATc                                                  <  1:2809109/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATc                                                  <  1:1202650/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATc                                                  <  1:3465853/100‑1 (MQ=255)

                                        ttGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATCGAAGATACATTACTTTCATTCTATGCATc                                                  <  1:5810938/100‑1 (MQ=255)

                                         tGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCa                                                 <  1:4732243/100‑1 (MQ=255)

                                         tGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCa                                                 <  1:417965/100‑1 (MQ=255)

                                         tGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCa                                                 <  1:4626653/100‑1 (MQ=255)

                                          ggTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGcctgtt                                                <  1:798901/100‑6 (MQ=255)

                                          ggTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCag                                                <  1:1571958/100‑2 (MQ=255)

                                          ggTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCag                                                <  1:3660089/100‑2 (MQ=255)

                                          ggTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCac                                                <  1:1781433/100‑2 (MQ=255)

                                            tGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATggtgtgcta                                              <  1:4574407/100‑9 (MQ=255)

                                            tGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATa                                              <  1:2008574/100‑1 (MQ=255)

                                                  tatatCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTa                                        <  1:5588265/100‑1 (MQ=255)

                                                        ttGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCttt                                  <  1:2940728/100‑1 (MQ=255)

                                                         tGTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTc                                 >  1:1994163/1‑100 (MQ=255)

                                                         tGTAATAATTCTGCAATTCTATTTGATTATATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTc                                 <  1:3880802/100‑1 (MQ=255)

                                                          gTAATAATTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCtttgc                                <  1:4555845/100‑3 (MQ=255)

                                                            aataatTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCAc                              <  1:2425734/100‑1 (MQ=255)

                                                              taatTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCAccc                            <  1:3911652/100‑1 (MQ=255)

                                                              taatTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCAccc                            <  1:3288995/100‑1 (MQ=255)

                                                               aatTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCAcctg                           <  1:3953770/100‑3 (MQ=255)

                                                                tctCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCat                          <  1:4237536/98‑1 (MQ=255)

                                                                gatCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCac                          <  1:70326/98‑2 (MQ=255)

                                                                atTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATGAGTTTAACCTTTCCACCCat                          <  1:5265737/100‑1 (MQ=255)

                                                                atTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCat                          <  1:1274707/100‑1 (MQ=255)

                                                                atTCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCaa                          <  1:4528515/100‑2 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCAcccgct                         <  1:4815200/100‑4 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatt                         <  1:5692518/100‑2 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatg                         <  1:5309283/100‑2 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatg                         <  1:5614287/100‑2 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCata                         <  1:2569738/100‑1 (MQ=255)

                                                                 ttCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCacg                         <  1:85458/100‑3 (MQ=255)

                                                                 ctCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCata                         <  1:1057620/99‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:5248686/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:4466972/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:3846745/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:549628/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:2493392/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:2331932/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:220905/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:3315508/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:3229535/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatat                        <  1:3046950/100‑1 (MQ=255)

                                                                  tCTGCAATTCTATTTGATTCTATATATTGAAGAACGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatac                        <  1:3110193/100‑2 (MQ=255)

                                                                   cttccgatCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCAtata                       <  1:1953819/93‑1 (MQ=255)

                                                                   cTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCAtata                       <  1:4363334/100‑1 (MQ=255)

                                                                   cTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCAtata                       <  1:3434226/100‑1 (MQ=255)

                                                                   cTGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCAtata                       <  1:6017756/100‑1 (MQ=255)

                                                                   atGCAATTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCagatc                       >  1:5818944/2‑99 (MQ=255)

                                                                    tGCAATTGTATTTGATTCTATATATTGAAGAATGGGCGGAATTGAAGACACATGACTTTCATGGAATGCAGCAATAAGTTTAACCTTTCCACCCATATaa                      <  1:410246/100‑1 (MQ=255)

                                                                       aaTTCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCatacaccta                   <  1:593622/100‑7 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:2591979/100‑1 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:4933127/100‑1 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:3173884/100‑1 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:640771/100‑1 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:789366/100‑1 (MQ=255)

                                                                         ttCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCt                 <  1:3805757/100‑1 (MQ=255)

                                                                          tCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCtg                <  1:1785835/100‑2 (MQ=255)

                                                                          tCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTa                <  1:2022819/100‑1 (MQ=255)

                                                                          tCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTa                <  1:745544/100‑1 (MQ=255)

                                                                          tCTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTa                <  1:10978/100‑1 (MQ=255)

                                                                           cTATTTGCTTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:3256562/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATGTAAATGCtct               <  1:1455200/100‑3 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTag               <  1:5221485/100‑2 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTaa               <  1:3782502/100‑2 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:238729/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:3390794/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:477573/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:5158049/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAt               <  1:2773492/100‑1 (MQ=255)

                                                                           cTATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAACGCtgg               <  1:173616/100‑3 (MQ=255)

                                                                            tATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCGCCCATATAAATGCTAtt              <  1:3993133/100‑1 (MQ=255)

                                                                            tATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAtt              <  1:2880364/100‑1 (MQ=255)

                                                                            tATTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAtt              <  1:1393969/100‑1 (MQ=255)

                                                                             aTTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTAttg             <  1:3724791/100‑2 (MQ=255)

                                                                             aTTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTa             <  1:2838938/100‑1 (MQ=255)

                                                                             aTTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTa             <  1:3628044/100‑1 (MQ=255)

                                                                             aTTTGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTa             <  1:2267399/100‑1 (MQ=255)

                                                                              tttGATTCTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTAc            <  1:608758/100‑1 (MQ=255)

                                                                                     cTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTACTTTGAtt     <  1:5094112/100‑1 (MQ=255)

                                                                                     cTATATATTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTACTTTGAtt     <  1:729494/100‑1 (MQ=255)

                                                                                       atatatTGAAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTACTTTGATTAg   >  1:1552648/1‑100 (MQ=255)

AAGCTGTCATCAATTTCATTACCAATTTTTACATTAATATTTGGTGAAGATATATCTTGTAATAATTCTGCAATTCTATTTGATTCTATATATTGTAGAATGGGCTGAATTGAAGATACATTACTTTCATTCAATGCATCAATAAGTTTAACCTTTCCACCCATATAAATGCTATTACTTTGATTAGA  >  NC_007793/1692097‑1692284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`