| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,533,312 | A→T | intergenic (‑165/+92) | SAUSA300_RS07445 ← / ← SAUSA300_RS07450 | 30S ribosomal protein S1/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,533,312 | 0 | A | T | 99.1% | 707.7 / ‑2.5 | 233 | intergenic (‑165/+92) | SAUSA300_RS07445/SAUSA300_RS07450 | 30S ribosomal protein S1/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (1/230); minor base . (0/2); total (1/232) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 | |||||||||||
Only 100 of 234 total aligned reads displayed.
TACCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCA > NC_007793/1533216‑1533406 | cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATc < 1:2099748/100‑1 (MQ=255) cTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATc < 1:4091212/100‑1 (MQ=255) tCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCa < 1:766061/100‑1 (MQ=255) cgcttACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCaa < 1:4712169/97‑1 (MQ=255) cGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCaa < 1:1796458/100‑1 (MQ=255) cGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCaa < 1:858789/100‑1 (MQ=255) tACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTa < 1:2277958/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATAc < 1:6040731/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATAc < 1:1955764/100‑1 (MQ=255) ttttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATAc < 1:640147/100‑1 (MQ=255) ttGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACaa < 1:1487263/100‑2 (MQ=255) gCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGtt < 1:5873986/100‑1 (MQ=255) gCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGtt < 1:3862417/100‑1 (MQ=255) gCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGtt < 1:2538490/100‑1 (MQ=255) gCGAAATAATCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCACAGTAATACAGtt < 1:4635356/100‑1 (MQ=255) gAAATAGTCATATACATAAATATGTCACTTTATTATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTg < 1:2600632/100‑1 (MQ=255) aaaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGc < 1:1962740/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACACCCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:1662650/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:2328882/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:480406/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:5570866/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:2147326/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:2730673/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:4458450/100‑1 (MQ=255) aaTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCt < 1:4236288/100‑1 (MQ=255) aTAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTa < 1:3624536/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCTATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:3490891/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTag < 1:483327/100‑2 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTag < 1:942927/100‑2 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:1395246/100‑1 (MQ=255) tAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTAt < 1:4265555/100‑1 (MQ=255) agccATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTaaa < 1:2841786/97‑3 (MQ=255) aGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATg < 1:4559607/100‑1 (MQ=255) gTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTagtg < 1:562791/100‑4 (MQ=255) tCATATACATAAATATGTCACTTTATCATATTCACGTCGTCATATCGATAACTATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATggg < 1:2498283/100‑3 (MQ=255) cATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGttt < 1:560996/100‑1 (MQ=255) taCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATAc < 1:2001227/100‑1 (MQ=255) taCATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATAc < 1:1933102/100‑1 (MQ=255) cATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAGGTAATACAGTTTGCTATGTTTATGCag < 1:3411628/100‑2 (MQ=255) gTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGt < 1:3229835/100‑1 (MQ=255) aCTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGtatg < 1:289906/100‑2 (MQ=255) ttCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCAt < 1:2689084/100‑1 (MQ=255) ttCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCAt < 1:5350389/100‑1 (MQ=255) gtcATATCGATAAATATTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACt < 1:2932986/100‑1 (MQ=255) atatTTATTACAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTtata < 1:4988984/100‑1 (MQ=255) ttattaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGta < 1:1164244/100‑2 (MQ=255) tattaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCt < 1:2939671/100‑1 (MQ=255) attaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACTTATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:5006889/100‑1 (MQ=255) attaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:1866385/100‑1 (MQ=255) attaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:3735687/100‑1 (MQ=255) attaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:4414691/100‑1 (MQ=255) attaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:4065289/100‑1 (MQ=255) attaCAACCA‑TTT‑TGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg < 1:5143263/100‑2 (MQ=255) ttaCAATCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg < 1:4602905/100‑2 (MQ=255) ttaCAACCATTTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTg < 1:448935/100‑1 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg < 1:662847/100‑2 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgg < 1:417379/100‑2 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTga < 1:1583235/100‑2 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt < 1:5355167/100‑1 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt < 1:3925013/100‑1 (MQ=255) ttaCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGt < 1:3941064/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggt < 1:1089860/100‑3 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggg < 1:5980936/100‑3 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTgga < 1:2988811/100‑3 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3981686/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:578577/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:5532800/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3348734/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3639413/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:5329149/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:5911134/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:5226815/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3674458/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:1269737/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3792112/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:1220290/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:2787531/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3250446/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:283491/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtc < 1:3137601/100‑1 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGta < 1:4952239/100‑2 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGta < 1:909250/100‑2 (MQ=255) taCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGta < 1:1322983/100‑2 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggtg < 1:2451789/100‑4 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTggta < 1:1759747/100‑4 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtct < 1:5864166/100‑2 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcg < 1:1368762/100‑2 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcc < 1:220219/100‑2 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca < 1:2115424/100‑1 (MQ=255) aCAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtca < 1:2673377/100‑1 (MQ=255) cAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcat < 1:2214846/100‑1 (MQ=255) cAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcat < 1:4133352/100‑1 (MQ=255) cAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcat < 1:3845422/100‑1 (MQ=255) cAACCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcag < 1:528374/100‑2 (MQ=255) aaCCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt < 1:1717111/100‑1 (MQ=255) aaCCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt < 1:207463/100‑1 (MQ=255) aaCCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatt < 1:3456743/100‑1 (MQ=255) aaCCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcatg < 1:3704412/100‑2 (MQ=255) aCCA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTTTTTTATAAGTCTGtcatac < 1:749575/100‑3 (MQ=255) cA‑TTTTTGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGtcacggcg < 1:3590988/100‑6 (MQ=255) | TACCTCGATTACATTTTGCGAAATAGTCATATACATAAATATGTCACTTTATCATATTCAAGTCGTCATATCGATAAATATTTATTACAACCA‑TTTATGTATCAAAGTAATACAGTTTGCTATGTTTATACATATTTTTTGTATAAAAATTAGCATAGCTTACTATTTTGTTTTATAAGTCTGTCATTTCA > NC_007793/1533216‑1533406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |