D37 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,363,207	A→T	I761F (ATT→TTT)	SAUSA300_RS06750 →	nuclease SbcCD subunit C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,363,207	0	A	T	98.2%	167.9 / ‑4.8	55	I761F (ATT→TTT)	SAUSA300_RS06750	nuclease SbcCD subunit C
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (54/0); minor base C (1/0); total (55/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.05e-01

AACTGATGACAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAAATTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAAAAGGAA  >  NC_007793/1363110‑1363303

aaCTGATGACAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCAtgaattt                                                                                                >  1:3667474/1‑100 (MQ=255)

aaCTGATGACAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCAtgaattt                                                                                                >  1:3613478/1‑100 (MQ=255)

       gaCAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATgg                                                                                         >  1:132102/1‑100 (MQ=255)

       gaCAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATgg                                                                                         >  1:1342832/1‑100 (MQ=255)

        ccAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGa                                                                                        >  1:2589961/2‑100 (MQ=255)

         cAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGaa                                                                                       >  1:5455097/1‑100 (MQ=255)

         cAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGaa                                                                                       >  1:3962483/1‑100 (MQ=255)

                ctaGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTa                                                                                >  1:4138066/2‑100 (MQ=255)

                  ggATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAgg                                                                              >  1:1331120/2‑100 (MQ=255)

                          taataGCCTGGAGGGGCGAGCAAGAGGAGTTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATc                                                                      >  1:512234/1‑100 (MQ=255)

                            ataGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCAt                                                                    >  1:930197/1‑100 (MQ=255)

                            ataGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCAt                                                                    >  1:6012060/1‑100 (MQ=255)

                            ataGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCAt                                                                    >  1:5225083/1‑100 (MQ=255)

                             taGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCAtt                                                                   >  1:2196275/1‑100 (MQ=255)

                              aGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTa                                                                  >  1:1641456/1‑100 (MQ=255)

                              aGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTa                                                                  >  1:5399358/1‑100 (MQ=255)

                              aGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTa                                                                  >  1:3184018/1‑100 (MQ=255)

                                     tgaggCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAgg                                                           >  1:1976450/4‑100 (MQ=255)

                                          gactggagagGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATaaa                                                      >  1:2047065/7‑100 (MQ=255)

                                          cgacccagagGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATaaa                                                      >  1:36217/7‑100 (MQ=255)

                                          ccaGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATaaa                                                      >  1:4884010/3‑100 (MQ=255)

                                           atgCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAag                                                     >  1:657920/3‑100 (MQ=255)

                                               cagagGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGtt                                                 >  1:4627239/2‑100 (MQ=255)

                                               cagagGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGtt                                                 >  1:861774/2‑100 (MQ=255)

                                                agagGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTa                                                >  1:2010017/1‑100 (MQ=255)

                                                     taTTAGAGCAGAAAAGGGATACCTATAAAAAACGTTATCATGAACTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGa                                           >  1:2058700/2‑100 (MQ=255)

                                                       caccaagggAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGAct                                         >  1:794070/9‑100 (MQ=255)

                                                        tAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActc                                        >  1:2155381/1‑100 (MQ=255)

                                                        ctaagCGGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActc                                        >  1:4442380/4‑100 (MQ=255)

                                                        acactgggAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActc                                        >  1:3422425/8‑100 (MQ=255)

                                                         atagCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActct                                       >  1:2547735/3‑100 (MQ=255)

                                                         agaggggAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActct                                       >  1:3078851/7‑100 (MQ=255)

                                                         aagggggAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGActct                                       >  1:2613568/7‑100 (MQ=255)

                                                          ctgCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTg                                      >  1:2631064/3‑100 (MQ=255)

                                                          cagCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTg                                      >  1:3314274/2‑100 (MQ=255)

                                                           agCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGa                                     >  1:5212066/1‑100 (MQ=255)

                                                           accggAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGa                                     >  1:1408523/5‑100 (MQ=255)

                                                            gCAGAAAAGGGATACTTATAAAAAACGTTATCCTGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGCCTCTGAt                                    >  1:212531/1‑100 (MQ=255)

                                                            gCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGAt                                    >  1:4802910/1‑100 (MQ=255)

                                                            gCAGAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGAt                                    >  1:3742262/1‑100 (MQ=255)

                                                              tgAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATaa                                  >  1:564795/2‑100 (MQ=255)

                                                               gAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATaaa                                 >  1:2277451/1‑100 (MQ=255)

                                                               gAAAAGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATaaa                                 >  1:630036/1‑100 (MQ=255)

                                                                 ccaGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAAta                               >  1:2586140/3‑99 (MQ=255)

                                                                 acaGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAAtt                               >  1:5947345/3‑100 (MQ=255)

                                                                 aaaGGGATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAAtt                               >  1:3749941/1‑100 (MQ=255)

                                                                   ggggATACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTaa                             >  1:5547106/2‑100 (MQ=255)

                                                                      cctACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAg                          >  1:4724381/3‑100 (MQ=255)

                                                                      attACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAg                          >  1:2095905/3‑100 (MQ=255)

                                                                        tACTTATAAAAAACGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGAt                        >  1:1156241/1‑100 (MQ=255)

                                                                                   caCGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCt             >  1:585067/2‑100 (MQ=255)

                                                                                   aaCGTTATCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCt             >  1:1424607/1‑100 (MQ=255)

                                                                                         aTCATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTaaaaaa       >  1:1197252/1‑100 (MQ=255)

                                                                                          gcATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTaaaaaat      >  1:4572224/2‑99 (MQ=255)

                                                                                          ccATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTaaaaaaa      >  1:4894856/2‑100 (MQ=255)

                                                                                           cATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAagag     >  1:5925962/1‑100 (MQ=255)

                                                                                           cATGAATTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTACTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAAAAg     >  1:727660/1‑100 (MQ=255)

                                                                                              gaatttgaaatGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAAAAGGaa  <  1:4344129/100‑1 (MQ=255)

                                                                                              gaatttgaaatGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAAAAGGaa  >  1:3093206/1‑100 (MQ=255)

AACTGATGACAATGATATAGATGAAATAATAGCCTGGAGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAAATTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCTGATAAATTAAAAGATGAATATGAGCTAAAAAAAGGAA  >  NC_007793/1363110‑1363303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`