Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,286,986 A→G K222R (AAA→AGA)  SAUSA300_RS06325 → cell division protein FtsK

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,286,9860AG100.0% 330.6 / NA 117K222R (AAA→AGA) SAUSA300_RS06325cell division protein FtsK
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (116/1);  total (116/1)

Only 100 of 121 total aligned reads displayed.

AGTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286888‑1287082
                                                                                                  |                                                                                                
ctgtGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCaaag                                                                                                 >  1:2900785/4‑99 (MQ=255)
 tgtGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1122158/3‑100 (MQ=255)
 cttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:3416201/2‑100 (MQ=255)
 attGCATTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGACGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1918121/2‑100 (MQ=255)
 attGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:5155728/2‑100 (MQ=255)
  ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGGAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:3162098/1‑100 (MQ=255)
  ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:3754882/1‑100 (MQ=255)
  ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:5353639/1‑100 (MQ=255)
  ctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:856624/2‑100 (MQ=255)
  cggCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:631035/3‑100 (MQ=255)
  cagCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:4924845/3‑100 (MQ=255)
  atGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAca                                                                                               >  1:405638/2‑99 (MQ=255)
  atGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:12097/2‑100 (MQ=255)
  atGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:682847/2‑100 (MQ=255)
   tGCACTGGAAAATATAAACGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:4210601/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGGTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAcag                                                                                              >  1:2135224/1‑98 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAGGAAAAAGCAAGACtt                                                                                              >  1:1143304/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:3314077/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:3700105/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:507528/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:2381490/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1910989/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1516713/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5582942/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5204565/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5134658/1‑100 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtc                                                                                              >  1:4079769/1‑99 (MQ=255)
   tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:1504475/1‑99 (MQ=255)
   tGCAATGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1723459/1‑100 (MQ=255)
   ggCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAcag                                                                                              >  1:4336177/2‑98 (MQ=255)
   ggCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1353259/2‑100 (MQ=255)
    tcACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4259035/2‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGGCTTa                                                                                             >  1:4810645/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAcaga                                                                                             >  1:1169042/1‑97 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACttg                                                                                             >  1:4247951/1‑99 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACttg                                                                                             >  1:5515152/1‑99 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtga                                                                                             >  1:1626305/1‑98 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtcg                                                                                             >  1:3407696/1‑98 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4406454/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4519555/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:5701937/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:468839/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:667801/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4054672/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3328825/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:1746838/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3223319/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:2964116/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:2719292/1‑100 (MQ=255)
    gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAACTGAAGCGTGAAGAAAAAGCAAGACtag                                                                                             >  1:5549654/1‑98 (MQ=255)
      ccTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTaaa                                                                                           >  1:5760034/2‑100 (MQ=255)
      aCTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCaaaaatcgga                                                                                           >  1:5433319/1‑94 (MQ=255)
      aCTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTaaa                                                                                           >  1:121656/1‑100 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtagatcgg                                                                                        >  1:5648679/1‑93 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtagatcgg                                                                                        >  1:1882413/1‑93 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:658663/1‑100 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:5101732/1‑100 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:2110685/1‑100 (MQ=255)
         ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGACGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:1971114/1‑100 (MQ=255)
                          ggtttggttCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCa                                                                       >  1:5573163/1‑100 (MQ=255)
                                           gAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACaaa                                                      >  1:1071618/1‑100 (MQ=255)
                                              taaaTGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATaa                                                   >  1:2481910/2‑100 (MQ=255)
                                              actaggggagaaagaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATaa                                                   >  1:1065265/10‑100 (MQ=255)
                                                  ttgcGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGa                                               >  1:4513124/4‑100 (MQ=255)
                                                    ctggAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATaaaaagat                                             >  1:1078992/3‑96 (MQ=255)
                                                         aagaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagt                                        >  1:4747106/1‑100 (MQ=255)
                                                         aagaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagt                                        >  1:4889621/1‑100 (MQ=255)
                                                          agaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagtg                                       >  1:1099632/1‑100 (MQ=255)
                                                            caaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAt                                     >  1:1042828/2‑100 (MQ=255)
                                                            aaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAt                                     >  1:1402070/1‑100 (MQ=255)
                                                             aaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAtt                                    >  1:3593211/1‑100 (MQ=255)
                                                              atgcaGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAttt                                   >  1:2182149/5‑100 (MQ=255)
                                                                 gaacaaaaCAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTAc                                >  1:5044367/5‑100 (MQ=255)
                                                                      gaaCAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAg                           >  1:3518054/2‑100 (MQ=255)
                                                                       caCAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGt                          >  1:5765562/2‑100 (MQ=255)
                                                                         tagaccgggCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGc                        >  1:1429712/9‑100 (MQ=255)
                                                                              tctccGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaa                   >  1:4204717/5‑100 (MQ=255)
                                                                              ccccagTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCCCaa                   >  1:4854149/6‑100 (MQ=255)
                                                                                         caaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:835049/2‑100 (MQ=255)
                                                                                         aaaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAACGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:4302421/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGGTTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:1582302/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:626730/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:5370870/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:2300873/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:191580/1‑100 (MQ=255)
                                                                                          aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:76365/1‑100 (MQ=255)
                                                                                            taGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTcc     >  1:2292260/2‑100 (MQ=255)
                                                                                             tgCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCa    >  1:2730582/2‑100 (MQ=255)
                                                                                             aGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCa    >  1:2325706/1‑100 (MQ=255)
                                                                                              gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:584234/1‑100 (MQ=255)
                                                                                              gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGAGCCTCAAGAAAGAGatcggaaga   >  1:2345872/1‑93 (MQ=255)
                                                                                              ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:4730088/2‑100 (MQ=255)
                                                                                              ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:1786253/2‑100 (MQ=255)
                                                                                              ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:4901175/2‑100 (MQ=255)
                                                                                              ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:4687407/2‑100 (MQ=255)
                                                                                              acAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:2571753/2‑100 (MQ=255)
                                                                                              acAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:3356430/2‑100 (MQ=255)
                                                                                               cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:583668/1‑100 (MQ=255)
                                                                                               cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:5085012/1‑100 (MQ=255)
                                                                                               cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:768209/1‑100 (MQ=255)
                                                                                                  |                                                                                                
AGTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286888‑1287082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑