D37 :: BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,625,515	0	C	T	61.4%	109.7 / 140.6	184	R291R (AGG→AGA)	SAUSA300_RS08025	geranyltranstransferase
Reads supporting (aligned to +/- strand): ref base C (4/67); new base T (0/113); total (4/180)
Fisher's exact test for biased strand distribution p-value = 2.10e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.58e-01

Only 100 of 240 total aligned reads displayed.

AAAAATCGATTAACAAACAACGTCAGTTGAATATGCCTTTTGAGACATTTCAAACTTTACAATTGTTGCTAATCGATATATTTGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTC  >  NC_007793/1625419‑1625614

                                                                gttgCTAATCGATATATTTGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTa                                  >  1:311144/1‑100 (MQ=255)

                                                                         cGATCTATTTGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCagggt                         <  1:5872462/100‑5 (MQ=255)

                                                                          gATCTATTTGGTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCAc                        <  1:4812025/100‑1 (MQ=255)

                                                                               gtttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCActgctg                   <  1:2233747/99‑1 (MQ=255)

                                                                               atTTGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCActgctt                   <  1:2363506/100‑2 (MQ=255)

                                                                                ttttCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACtgctgc                  <  1:2406608/100‑1 (MQ=255)

                                                                                tttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCActgctgt                  <  1:5973274/100‑2 (MQ=255)

                                                                                tttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACtgctgc                  <  1:1294340/100‑1 (MQ=255)

                                                                                tttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACtgctgc                  <  1:643154/100‑1 (MQ=255)

                                                                                tttGCCTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACtgctgc                  <  1:2095684/100‑1 (MQ=255)

                                                                                 ttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCg                 <  1:653626/100‑1 (MQ=255)

                                                                                 ttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCg                 <  1:5573367/100‑1 (MQ=255)

                                                                                 ttGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCg                 <  1:4308846/100‑1 (MQ=255)

                                                                                  tGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCActgcccgcg                <  1:1874023/100‑6 (MQ=255)

                                                                                  tGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCgg                <  1:531747/100‑2 (MQ=255)

                                                                                  tGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:719272/100‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGTTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:744037/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGTTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:231172/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGGCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:3347963/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAGATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:546700/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:2741647/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:255238/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:688781/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:1172286/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATCGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:1107792/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:1587366/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:157869/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:4689786/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:4756534/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCGATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:258870/90‑1 (MQ=255)

                                                                                  gtgctcttccgATCTCTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:5051561/90‑1 (MQ=255)

                                                                                  gtactcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGt                <  1:2982680/90‑1 (MQ=255)

                                                                                   gtgctcttcgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGta               <  1:2858383/91‑2 (MQ=255)

                                                                                   gCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtc               <  1:1182364/100‑1 (MQ=255)

                                                                                    gctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtct              <  1:516884/92‑1 (MQ=255)

                                                                                    gctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtcg              <  1:479084/92‑2 (MQ=255)

                                                                                    gctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtcg              <  1:1773427/92‑2 (MQ=255)

                                                                                    gctcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCAACAATTTGCGTTAGTTCATCCACTGCTGCGtct              <  1:1473619/92‑1 (MQ=255)

                                                                                     ttttAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtctc             <  1:1382960/100‑1 (MQ=255)

                                                                                     ctcttccgATCTCTGCTGTATAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtcgg             <  1:291201/93‑3 (MQ=255)

                                                                                     ctcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATCAGTGTTTTGTATTGAATTGTTCATTACTTTGCGTTAGTTCATCCACTGCTGCGtcgt             <  1:4660533/93‑3 (MQ=255)

                                                                                      tttAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACtgctgccccatg            <  1:5222884/100‑7 (MQ=255)

                                                                                      ttccgatctCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:3754414/92‑1 (MQ=255)

                                                                                      ttccgatctCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTACATCCACTGCTGCGTctct            <  1:454750/92‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCTTTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:3587873/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:3984447/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:1025724/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:5265264/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:3552985/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:5876284/94‑1 (MQ=255)

                                                                                      tcttccgATCTCTGCCATAAAATAAATCAACGATCTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtctcc            <  1:5887471/94‑2 (MQ=255)

                                                                                      cttccgatctccTGGTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:144516/90‑1 (MQ=255)

                                                                                      cttccgatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTctct            <  1:1783713/90‑1 (MQ=255)

                                                                                       cttccgATCTCTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTa           <  1:126797/95‑1 (MQ=255)

                                                                                        tccgatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTAt          <  1:894320/92‑1 (MQ=255)

                                                                                         tccgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCCTCTCTATg         <  1:4900171/97‑1 (MQ=255)

                                                                                         tccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGtctcccct         <  1:3236901/97‑5 (MQ=255)

                                                                                         tccgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATg         <  1:3707865/97‑1 (MQ=255)

                                                                                         ccgatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATg         <  1:2449559/93‑1 (MQ=255)

                                                                                         ccgatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTCCATCCACTGCTGCGTCTCTATg         <  1:2419355/93‑1 (MQ=255)

                                                                                          gTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATgg        <  1:495941/100‑2 (MQ=255)

                                                                                           gatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:4425825/95‑1 (MQ=255)

                                                                                           gatctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:3940784/95‑1 (MQ=255)

                                                                                           gatctccTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:413096/95‑1 (MQ=255)

                                                                                           cgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:3484803/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:4288609/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:922392/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:3041524/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTCTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:851927/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTCTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:2172772/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:5570273/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:947282/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:166312/99‑1 (MQ=255)

                                                                                           cgATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:1709350/99‑1 (MQ=255)

                                                                                           cgATCTCTGCCGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:4321520/99‑1 (MQ=255)

                                                                                           cgATCTCTGCCCTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:5491127/99‑1 (MQ=255)

                                                                                           cgATCTCTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGTGTCTCTATGAt       <  1:5637606/99‑1 (MQ=255)

                                                                                           cgATCTCTGCCATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATgcc       <  1:316731/99‑3 (MQ=255)

                                                                                           cgATCTCTGCCATAAAATAAACCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGCCTCTATGAt       <  1:3200154/99‑1 (MQ=255)

                                                                                           cgATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:4223607/99‑1 (MQ=255)

                                                                                           atctgccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAt       <  1:836540/95‑1 (MQ=255)

                                                                                            tctCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:114706/98‑1 (MQ=255)

                                                                                            tctCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:595199/98‑1 (MQ=255)

                                                                                            tactccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:3253952/96‑1 (MQ=255)

                                                                                            gATCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:1342739/100‑1 (MQ=255)

                                                                                            gATCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:2181181/100‑1 (MQ=255)

                                                                                            gATCTCTGCGATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:4389116/100‑1 (MQ=255)

                                                                                            gATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:5716980/100‑1 (MQ=255)

                                                                                            gATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:2806301/100‑1 (MQ=255)

                                                                                            gATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:2664490/100‑1 (MQ=255)

                                                                                            atctccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATa      <  1:3368515/96‑1 (MQ=255)

                                                                                            atctccTGCTATAAAATAAAACAACGATTTCTAATATGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGAtc      <  1:5789599/96‑2 (MQ=255)

                                                                                             aTCTCTGCTGTAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATag     <  1:2774393/100‑2 (MQ=255)

                                                                                             aTCTCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATaa     <  1:5101450/100‑1 (MQ=255)

                                                                                               cccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATTAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATgggcctg   <  1:5848451/100‑7 (MQ=255)

                                                                                                ccTGTTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTc  >  1:4537929/1‑100 (MQ=255)

                                                                                                ccTGTTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTc  >  1:4570170/1‑100 (MQ=255)

                                                                                                ccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTc  >  1:5623130/1‑100 (MQ=255)

                                                                                                ccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTc  >  1:2030879/1‑100 (MQ=255)

                                                                                                ccTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTc  <  1:391843/100‑1 (MQ=255)

AAAAATCGATTAACAAACAACGTCAGTTGAATATGCCTTTTGAGACATTTCAAACTTTACAATTGTTGCTAATCGATATATTTGCTTTTAGTGATCCCTGCTATAAAATAAATCAACGATTTCTAATAAGTGTTTTGTATTGAATTGTTCATCAATTTGCGTTAGTTCATCCACTGCTGCGTCTCTATGATAAGTC  >  NC_007793/1625419‑1625614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`