Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	888379	888395	17	1 [0]	[0] 1	SAUSA300_RS04365	primase

AATGGAAGAAAATTGGATTGAAGAAGGAAAACGAGGGCGAAAGCCTACAACAATTAGCCCTATAAAATGTGCATATATTTTGAATGAGCATTTAACATTT  >  NC_007793/888394‑888493   |                                                                                                  cgtGGAAGAAAATTGGATTGAAGAAGGAAAACGAGGGCGAAAGCCTACAACAATTAGCCCTATAAAATGTGCATATATTTTGAATGAGCATTTAACAttt  >  1:4135755/3‑100 (MQ=255)   |                                                                                                  AATGGAAGAAAATTGGATTGAAGAAGGAAAACGAGGGCGAAAGCCTACAACAATTAGCCCTATAAAATGTGCATATATTTTGAATGAGCATTTAACATTT  >  NC_007793/888394‑888493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑