| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | NC_007792 | 1,916 | Δ22,120 bp | between repeat_region | SAUSA300_RS14750–SAUSA300_RS14855 | 22 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, SAUSA300_RS14850, SAUSA300_RS14855 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007792 | 1913 | 23242 | 21330 | 89 [0] | [0] 9 | SAUSA300_RS14750–[SAUSA300_RS14850] | 21 genes SAUSA300_RS14750, SAUSA300_RS14755, SAUSA300_RS14760, SAUSA300_RS14765, SAUSA300_RS14770, SAUSA300_RS14775, SAUSA300_RS14780, SAUSA300_RS14785, SAUSA300_RS14790, SAUSA300_RS14795, SAUSA300_RS14800, SAUSA300_RS14805, SAUSA300_RS14810, SAUSA300_RS14815, SAUSA300_RS14820, SAUSA300_RS14825, SAUSA300_RS14830, SAUSA300_RS14835, SAUSA300_RS14840, SAUSA300_RS14845, [SAUSA300_RS14850] |
GAAATAATTTGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTA > NC_007792/23233‑23338 | gcagttaggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAgg > 1:913775/11‑100 (MQ=255)acagttaggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAgg > 1:2551337/11‑100 (MQ=255)acagttaggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAgg > 1:355024/11‑100 (MQ=255)acagttaggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAgg < 1:5365748/90‑1 (MQ=255) actaggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATg > 1:4178221/8‑100 (MQ=12) tgtggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGt > 1:2309765/7‑100 (MQ=12) taggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGtt < 1:1020751/95‑1 (MQ=17) taggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGtt < 1:4509521/95‑1 (MQ=17) aggaggTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTa > 1:4976447/5‑100 (MQ=17) | GAAATAATTTGGTTCTGTTGCAAAGTTGAATTTATAATATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTA > NC_007792/23233‑23338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |