Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2198344	2198377	34	1 [0]	[0] 1	SAUSA300_RS11200	histidine kinase

AAAAGCAAGTGCATCAACATCTCATGCTTGCAAAATCATTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGGTG  >  NC_007793/2198377‑2198476  |                                                                                                   taaaGCAAGTGCATCAACATCTCATGCTTGCAAAATCATTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGgtg  >  1:1830781/2‑100 (MQ=255)  |                                                                                                   AAAAGCAAGTGCATCAACATCTCATGCTTGCAAAATCATTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGGTG  >  NC_007793/2198377‑2198476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑