Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1190989	1190990	2	1 [0]	[0] 1	SAUSA300_RS05900	transposase

CTGGGACATTAAGTTCTTAGGCAATGTAAAAAGCTGATTTCTATTAATTATTTGATAGAAATCAGCTTTTTTGATATGTATTTTATAATGTACAGCTCGT  >  NC_007793/1190990‑1191089  |                                                                                                   atGGGACATTAAGTTCTTAGGCAATGTAAAAAGCTGATTTCTATTAATTATTTGATAGAAATCAGCTTTTTTGATATGTATTTTATAATGTACAGCTCGt  >  1:5616306/2‑100 (MQ=25)  |                                                                                                   CTGGGACATTAAGTTCTTAGGCAATGTAAAAAGCTGATTTCTATTAATTATTTGATAGAAATCAGCTTTTTTGATATGTATTTTATAATGTACAGCTCGT  >  NC_007793/1190990‑1191089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑