Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2197985	2198001	17	1 [0]	[0] 1	SAUSA300_RS11200	histidine kinase

AAATTTTAAATCATGGTATCGATGTTCATACCACTTTGAACATTCAACATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTAA  >  NC_007793/2197885‑2197984                                                                                                    | aaaTTTTAAATCATGGTATCGATGTTCATACCACTTTGAACATTCAACATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTaa  <  1:2990434/100‑1 (MQ=255)                                                                                                    | AAATTTTAAATCATGGTATCGATGTTCATACCACTTTGAACATTCAACATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTAA  >  NC_007793/2197885‑2197984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑