Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2114923	2115004	82	1 [0]	[0] 1	SAUSA300_RS10735	replication protein DnaD

CACGTACTTGTTCAATAGATTTCAAGTTTGCATTAAGCCATGTATTCAAAATGCTTTTAGCATATCCCCAAGTAACTTTGTTTCTGTCTTTAGCGATTTT  >  NC_007793/2114823‑2114922                                                                                                    | cACGTACTTGTTCAATAGATTTCAAGTTTGCATTAAGCCATGTATTCAAAATGCTTTTAGCATATCCCCAAGTAACTTTGTTTCTGTCTTTAGCGAtttt  <  1:2932497/100‑1 (MQ=255)                                                                                                    | CACGTACTTGTTCAATAGATTTCAAGTTTGCATTAAGCCATGTATTCAAAATGCTTTTAGCATATCCCCAAGTAACTTTGTTTCTGTCTTTAGCGATTTT  >  NC_007793/2114823‑2114922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑