Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1378942	1378951	10	4 [0]	[0] 2	SAUSA300_RS06805	protein GlcT

CAAGAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAG  >  NC_007793/1378842‑1378941                                                                                                    | cAATAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAg  >  1:2945842/1‑100 (MQ=255) cAAGAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAg  >  1:1736168/1‑100 (MQ=255) cAAGAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAg  >  1:3131279/1‑100 (MQ=255) cAAGAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAg  >  1:5733984/1‑100 (MQ=255)                                                                                                    | CAAGAAGTTATTTTAATCGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAATTAG  >  NC_007793/1378842‑1378941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑