Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,607,912 Δ1 bp coding (88/696 nt) SAUSA300_RS13410 ← oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,607,9090C.98.8% 333.4 / ‑3.3 85coding (91/696 nt)SAUSA300_RS13410oxidoreductase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base . (5/79);  total (5/80)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

GTTGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTGCCCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATAA  >  NC_007793/2607821‑2608001
                                                                                        |                                                                                            
ggggggcacaCCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATg                                                                                  >  1:4344575/10‑100 (MQ=255)
gTTGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATg                                                                                  <  1:2965568/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:1053284/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:4653687/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:2718173/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:2348644/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:6010066/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:698906/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgt                                                                                 <  1:1514737/100‑1 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgc                                                                                 <  1:4794298/100‑2 (MQ=255)
 ttGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACGTTTG‑CCCTTCTTCATgt                                                                                 <  1:4331085/100‑1 (MQ=255)
     cACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATgtagta                                                                             <  1:322994/100‑1 (MQ=255)
            ttCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGc                                                                      <  1:2912384/100‑1 (MQ=255)
             tCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCa                                                                     <  1:4725206/100‑1 (MQ=255)
               ttccgaTCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAAt                                                                   <  1:2650087/95‑1 (MQ=255)
               actcTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTTCCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAAt                                                                   <  1:4261187/97‑1 (MQ=255)
               acacTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAAt                                                                   <  1:4358143/100‑1 (MQ=255)
               acacTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAAt                                                                   <  1:463768/100‑1 (MQ=255)
                        tgtgACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTcc                                                          >  1:1597805/1‑100 (MQ=255)
                              aaTTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCacaggg                                                    <  1:3033536/100‑6 (MQ=255)
                              aaTTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATAcc                                                    <  1:3601585/100‑1 (MQ=255)
                              aaTTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATAcc                                                    <  1:2969440/100‑1 (MQ=255)
                               aTTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCa                                                   <  1:1762048/100‑1 (MQ=255)
                                ttGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCAc                                                  <  1:5934020/100‑1 (MQ=255)
                                ttGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCAc                                                  <  1:2556452/100‑1 (MQ=255)
                                ttGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCAc                                                  <  1:1447861/100‑1 (MQ=255)
                                 tGATTTGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:3999986/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:777448/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:3598180/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:3359780/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:1962847/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:5293728/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:5928606/100‑1 (MQ=255)
                                 tGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACt                                                 <  1:5314075/100‑1 (MQ=255)
                                  gATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTa                                                <  1:2299849/100‑1 (MQ=255)
                                  gATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTa                                                <  1:5734241/100‑1 (MQ=255)
                                   aTTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTag                                               <  1:1793460/100‑2 (MQ=255)
                                    ttCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTaat                                              <  1:3598567/100‑3 (MQ=255)
                                      tcgctcGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTAcccc                                            <  1:2866652/95‑3 (MQ=255)
                                      cGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTAccat                                            <  1:4988575/100‑3 (MQ=255)
                                      cGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTg                                            <  1:3817847/100‑1 (MQ=255)
                                       gCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCtag                                           <  1:3821095/100‑3 (MQ=255)
                                       gCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTga                                           <  1:1641544/100‑2 (MQ=255)
                                       gCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGc                                           <  1:1916276/100‑1 (MQ=255)
                                       gCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGc                                           <  1:4814068/100‑1 (MQ=255)
                                       gCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGc                                           <  1:2797957/100‑1 (MQ=255)
                                       ctaaCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTAccagt                                           <  1:167121/97‑4 (MQ=255)
                                       ccTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCATTACCACTACCTGc                                           <  1:2006343/99‑1 (MQ=255)
                                        cTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGcg                                          <  1:5806377/100‑2 (MQ=255)
                                          atgTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAcc                                        <  1:1966114/98‑1 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAct                                        <  1:1526542/100‑2 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAcc                                        <  1:3472596/100‑1 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAcc                                        <  1:4562797/100‑1 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAcc                                        <  1:731629/100‑1 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAca                                        <  1:5122601/100‑2 (MQ=255)
                                          aCGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAca                                        <  1:952254/100‑2 (MQ=255)
                                           cGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCAccc                                       <  1:3411393/100‑2 (MQ=255)
                                            gTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTg                                      <  1:4184966/100‑1 (MQ=255)
                                            gTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTg                                      <  1:5032720/100‑1 (MQ=255)
                                            gTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTg                                      <  1:4547854/100‑1 (MQ=255)
                                             ttttGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGt                                     <  1:4533193/100‑1 (MQ=255)
                                             ttttGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGt                                     <  1:2942678/100‑1 (MQ=255)
                                             ttttGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGt                                     <  1:4413889/100‑1 (MQ=255)
                                             ttttGTAATTCTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGt                                     <  1:2069069/100‑1 (MQ=255)
                                              tttGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTa                                    <  1:1091796/100‑1 (MQ=255)
                                              tttGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTa                                    <  1:2057104/100‑1 (MQ=255)
                                                 gTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAact                                 <  1:1887026/100‑1 (MQ=255)
                                                              aTTTCTACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTac                    <  1:4036449/100‑2 (MQ=255)
                                                                   tACCTGCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTTTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGtt               <  1:1201261/100‑1 (MQ=255)
                                                                    aCCTGTTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTa              >  1:3347127/1‑100 (MQ=255)
                                                                        gCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATAc          >  1:4339420/1‑100 (MQ=255)
                                                                        gCTAAGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATAc          >  1:1536691/1‑100 (MQ=255)
                                                                            aGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTc      <  1:4433660/100‑1 (MQ=255)
                                                                            aGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTc      <  1:5425453/100‑1 (MQ=255)
                                                                            aGACAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTc      <  1:3428424/100‑1 (MQ=255)
                                                                             gACAACTTTTGCCCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTc      <  1:4154041/100‑1 (MQ=255)
                                                                              aCAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATCCTGTCAt    <  1:1458842/100‑1 (MQ=255)
                                                                              aCAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCAt    <  1:5570572/100‑1 (MQ=255)
                                                                              aCAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCAt    <  1:2297069/100‑1 (MQ=255)
                                                                              aCAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCAt    <  1:2955333/100‑1 (MQ=255)
                                                                               cAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATa   <  1:4424406/100‑1 (MQ=255)
                                                                               cAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATa   <  1:1764316/100‑1 (MQ=255)
                                                                               cAACTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATa   <  1:2851888/100‑1 (MQ=255)
                                                                                aaCTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATaa  <  1:2169768/100‑1 (MQ=255)
                                                                                aaCTTTTG‑CCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATaa  <  1:3966016/100‑1 (MQ=255)
                                                                                        |                                                                                            
GTTGGCACTACCTTCACACTATCTTGTGACAATTGATTCGCTACGTTTTGTAATTTTTCTTTATTTCTACCTGCTAAGACAACTTTTGCCCCTTCTTCATGTAGTAATGTTGCAATTGCTTCTCCAATACCACTACCTGCACCTGTAACTACTGCTACTTTATCTGTTAATACTGTCATAA  >  NC_007793/2607821‑2608001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑