Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,236,661 G→A V236V (GTC→GTT)  SAUSA300_RS11425 ← transcription termination factor Rho

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,236,6610GA100.0% 708.7 / NA 227V236V (GTC→GTT) SAUSA300_RS11425transcription termination factor Rho
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (2/225);  total (2/225)

Only 100 of 227 total aligned reads displayed.

TCCCCAATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACGACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGTTTG  >  NC_007793/2236569‑2236751
                                                                                            |                                                                                          
tCCCCGATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcag                                                                                     >  1:4125285/1‑100 (MQ=255)
 ccccTATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcagc                                                                                    <  1:2635698/100‑1 (MQ=255)
 ccccAGTTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcagc                                                                                    <  1:3223622/100‑1 (MQ=255)
 ccccAATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcagc                                                                                    <  1:2303206/100‑1 (MQ=255)
 ccccAATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcagc                                                                                    <  1:1884945/100‑1 (MQ=255)
    taaTTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTcagcagg                                                                                 <  1:1843302/99‑2 (MQ=255)
    cAATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCagcagc                                                                                 <  1:3432905/100‑1 (MQ=255)
     aaTTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCagcagcg                                                                                <  1:2337457/100‑2 (MQ=255)
      aTTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCtt                                                                               <  1:4106036/100‑1 (MQ=255)
       tttCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCttg                                                                              <  1:796450/100‑2 (MQ=255)
        ttCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCttag                                                                             <  1:370201/100‑3 (MQ=255)
        ttCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCt                                                                             <  1:4872569/100‑1 (MQ=255)
        ttCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCt                                                                             <  1:1272189/100‑1 (MQ=255)
           tactaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTAcg                                                                          <  1:4920600/100‑2 (MQ=255)
            actcAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCAACTg                                                                         <  1:1455442/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCGAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:2287365/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAGCAACTTCAGCAGCTTCTACTg                                                                         <  1:1388219/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:791671/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:2765401/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:3863098/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:2557952/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:2031931/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:2175472/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTg                                                                         <  1:400761/100‑1 (MQ=255)
            actaAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGAAGCTTCTACTg                                                                         <  1:3898111/100‑1 (MQ=255)
              taAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAg                                                                       <  1:3017708/100‑1 (MQ=255)
               aaaCGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGacc                                                                      <  1:3256062/100‑3 (MQ=255)
                aaCGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAgtt                                                                     <  1:746058/100‑3 (MQ=255)
                   gCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGtcg                                                                  <  1:3146314/100‑3 (MQ=255)
                   gCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGGGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGttg                                                                  <  1:4416602/100‑2 (MQ=255)
                            gTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTgc                                                         <  1:4981286/100‑2 (MQ=255)
                            gTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGt                                                         <  1:5467785/100‑1 (MQ=255)
                             ttCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGtt                                                        <  1:1134272/100‑1 (MQ=255)
                             ttCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGtt                                                        <  1:3598176/100‑1 (MQ=255)
                             ttCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGtt                                                        <  1:4625330/100‑1 (MQ=255)
                             ttCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGtt                                                        <  1:72312/100‑1 (MQ=255)
                               cAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAc                                                      <  1:5116462/100‑1 (MQ=255)
                                aaGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAcg                                                     <  1:1976209/100‑2 (MQ=255)
                                aaGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAcc                                                     <  1:5133061/100‑1 (MQ=255)
                                aaGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAcc                                                     <  1:1942516/100‑1 (MQ=255)
                                aaGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAcc                                                     <  1:5057123/100‑1 (MQ=255)
                                 aGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAGCTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACct                                                    <  1:3731174/100‑1 (MQ=255)
                                 aGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTAcca                                                    <  1:3383078/100‑2 (MQ=255)
                                 aGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACct                                                    <  1:2970353/100‑1 (MQ=255)
                                 aGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACct                                                    <  1:1329152/100‑1 (MQ=255)
                                  gTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctg                                                   <  1:1059111/100‑2 (MQ=255)
                                  gTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctc                                                   <  1:4034180/100‑1 (MQ=255)
                                  gTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACcta                                                   <  1:5378612/100‑2 (MQ=255)
                                   taataaTTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctcc                                                  <  1:5183997/100‑2 (MQ=255)
                                   taataaTTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctat                                                  <  1:346916/100‑3 (MQ=255)
                                    aataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctgtg                                                 <  1:2193083/100‑4 (MQ=255)
                                    aataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctctg                                                 <  1:572400/100‑2 (MQ=255)
                                     ataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACctctgc                                                <  1:135363/100‑3 (MQ=255)
                                     ataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCtta                                                <  1:4672035/100‑2 (MQ=255)
                                     ataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTc                                                <  1:5290848/100‑1 (MQ=255)
                                     ataatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTc                                                <  1:1160613/100‑1 (MQ=255)
                                       aatTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAg                                              <  1:2412934/100‑1 (MQ=255)
                                        atTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAgg                                             <  1:2699109/100‑1 (MQ=255)
                                        atTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAga                                             <  1:2468492/100‑2 (MQ=255)
                                            aGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGatgg                                         <  1:5005578/100‑4 (MQ=255)
                                                 cTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGcc                                    <  1:1054494/100‑1 (MQ=255)
                                                 cTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGcc                                    <  1:3405349/100‑1 (MQ=255)
                                                 cTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGcc                                    <  1:604351/100‑1 (MQ=255)
                                                  tttAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCa                                   <  1:1041913/100‑1 (MQ=255)
                                                    tAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCaca                                 <  1:427180/100‑3 (MQ=255)
                                                     aaCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACt                                <  1:4479760/100‑1 (MQ=255)
                                                     aaCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACt                                <  1:3542869/100‑1 (MQ=255)
                                                     aaCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACt                                <  1:562902/100‑1 (MQ=255)
                                                     aaCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACt                                <  1:1927924/100‑1 (MQ=255)
                                                     aaCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACt                                <  1:22390/100‑1 (MQ=255)
                                                      aCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTa                               <  1:3648762/100‑1 (MQ=255)
                                                      aCATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTa                               <  1:3577940/100‑1 (MQ=255)
                                                         tGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGTAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACa                            <  1:4213866/100‑1 (MQ=255)
                                                         tGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACa                            <  1:4052060/100‑1 (MQ=255)
                                                         tGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACa                            <  1:1211494/100‑1 (MQ=255)
                                                         tGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACa                            <  1:1222808/100‑1 (MQ=255)
                                                         tGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACa                            <  1:2645608/100‑1 (MQ=255)
                                                          ggTGTTCTGGTGGTTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACaa                           <  1:4191540/100‑1 (MQ=255)
                                                                      gtTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAgggc               <  1:1428195/100‑4 (MQ=255)
                                                                      gtTCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCtt               <  1:829067/100‑1 (MQ=255)
                                                                       ttCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCttg              <  1:4351577/100‑2 (MQ=255)
                                                                        tCGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTg             <  1:4730930/100‑1 (MQ=255)
                                                                         cGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTgg            <  1:3930689/100‑2 (MQ=255)
                                                                         cGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGc            <  1:3365834/100‑1 (MQ=255)
                                                                         cGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGc            <  1:2904789/100‑1 (MQ=255)
                                                                         cGTCAAACGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGc            <  1:2146959/100‑1 (MQ=255)
                                                                             aaaCGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACCAAATAAATAGCTTTGCATCt        <  1:1542024/100‑1 (MQ=255)
                                                                              aaCGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTg       <  1:4304706/100‑1 (MQ=255)
                                                                              aaCGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTg       <  1:1872852/100‑1 (MQ=255)
                                                                               aCGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTTAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTCCATCTgg      <  1:5336617/100‑1 (MQ=255)
                                                                               aCGTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTgg      <  1:3120755/100‑1 (MQ=255)
                                                                                 gTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGtt    <  1:81/100‑1 (MQ=255)
                                                                                 gTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGtt    <  1:3835589/100‑1 (MQ=255)
                                                                                 gTTGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGtt    <  1:2495187/100‑1 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTggcgg   <  1:2867646/100‑4 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGttt   <  1:4761639/100‑1 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGttt   <  1:4272445/100‑1 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGttt   <  1:4778672/100‑1 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGtta   <  1:684891/100‑2 (MQ=255)
                                                                                  ttGAATGAACAACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGtta   <  1:1048250/100‑2 (MQ=255)
                                                                                            |                                                                                          
TCCCCAATTTCTACTAAACGCTTTGCACGTTCAAGTAATAATTCAGCTACTTTAACATGGTGTTCTGGTGGTTCGTCAAACGTTGAATGAACGACTTCAGCAGCTTCTACTGAGCGTTCTAAATCTGTTACCTCTTCAGGACGCTCGCCAACTAACAAAATAAATAGCTTTGCATCTGGTTTG  >  NC_007793/2236569‑2236751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑