D32 :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	1,354,028	C→T	Y81Y (TAC→TAT)	SAUSA300_RS06705 →	secretion protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	1,354,028	0	C	T	99.2%	422.0 / NA	132	Y81Y (TAC→TAT)	SAUSA300_RS06705	secretion protein
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (128/3); minor base G (1/0); total (129/3)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 141 total aligned reads displayed.

TTACAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATACAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGAACAAAATAA  >  NC_007793/1353932‑1354114

gtACAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAaatataat                                                                                      >  1:2268515/2‑100 (MQ=255)

 tACAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAaatataata                                                                                     >  1:2098536/1‑100 (MQ=255)

 tACAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAaatataata                                                                                     >  1:547342/1‑100 (MQ=255)

  aCAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAaatataatac                                                                                    >  1:3637454/1‑100 (MQ=255)

   taataatTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAatataataca                                                                                   >  1:1399651/2‑100 (MQ=255)

   cAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAatataataca                                                                                   >  1:2506364/1‑100 (MQ=255)

      taatTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCt                                                                                <  1:5350418/100‑1 (MQ=255)

              taATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGt                                                                        >  1:1222452/1‑100 (MQ=255)

               tgtGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGtt                                                                       >  1:1273906/3‑100 (MQ=255)

                 tGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACATAGATCggaaga                                                                     >  1:3386103/1‑96 (MQ=255)

                  gATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTa                                                                    >  1:315256/1‑100 (MQ=255)

                  gATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTa                                                                    >  1:2255042/1‑100 (MQ=255)

                  gATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTa                                                                    >  1:2133970/1‑100 (MQ=255)

                  gATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTa                                                                    >  1:2085265/1‑100 (MQ=255)

                    agcagtACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAg                                                                  >  1:1077132/6‑100 (MQ=255)

                     taGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAGATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:1815074/2‑100 (MQ=255)

                     taGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:2997869/2‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATTCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAGATCggaagagcac                                                                 >  1:5211565/1‑92 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgt                                                                 >  1:3813342/1‑99 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:2832412/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:2271875/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:911648/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:5047773/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:4360402/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:2943639/1‑100 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCAAGATCggaagagcac                                                                 >  1:2536176/1‑92 (MQ=255)

                     aaGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATAAAAAATTAAATATAATACACCTAAATCGGTTGTAAgg                                                                 >  1:870106/1‑100 (MQ=255)

                      ggctACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAgca                                                                >  1:3218450/4‑98 (MQ=255)

                      ggctACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGc                                                                >  1:2360334/4‑100 (MQ=255)

                      gcctACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGc                                                                >  1:4494087/4‑100 (MQ=255)

                      ctaggcctGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGc                                                                >  1:301457/8‑100 (MQ=255)

                      aGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGc                                                                >  1:246155/1‑100 (MQ=255)

                      aGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGc                                                                >  1:824720/1‑100 (MQ=255)

                       gTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa                                                               >  1:5482085/1‑100 (MQ=255)

                       gTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTG‑AAGGCa‑a                                                             >  1:1772938/1‑100 (MQ=255)

                       gTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAACCGGTTGTAAGGCa                                                               >  1:2950061/1‑100 (MQ=255)

                       cttACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGGTGTAAGGCa                                                               >  1:377308/2‑100 (MQ=255)

                       cgtACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa                                                               >  1:397564/3‑100 (MQ=255)

                         tACATGAAAGATAAGGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAGGGCa‑aa                                                            >  1:3628804/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:2535871/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:4190397/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:744720/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:621099/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:1508596/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:2170977/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCa‑aa                                                            >  1:4902772/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAAGCa‑aa                                                            >  1:762609/1‑100 (MQ=255)

                         tACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAAACa‑aa                                                            >  1:1882920/1‑100 (MQ=255)

                          ccATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGACA‑AAg                                                           >  1:3345376/2‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAGGGCA‑AAg                                                           >  1:3884793/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAGGGCA‑AAg                                                           >  1:4374628/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCg‑aaa                                                           >  1:1678315/1‑99 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAg                                                           >  1:3416313/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAg                                                           >  1:4825709/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAg                                                           >  1:4324889/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAg                                                           >  1:282145/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAg                                                           >  1:1591303/1‑100 (MQ=255)

                          aCATGAAAGATAAAGTTAATGCGTTAGATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCT‑AATCGGTTGTAGGGCA‑AAGa                                                          >  1:4934112/1‑100 (MQ=255)

                           gaTGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGa                                                          >  1:866245/2‑100 (MQ=255)

                           cATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGa                                                          >  1:4539057/1‑100 (MQ=255)

                             tGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGAtt                                                        >  1:1121196/1‑100 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCATAAGAtc                                                        >  1:390795/1‑99 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGAtcg                                                       >  1:1046311/1‑98 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGAtcg                                                       >  1:1306609/1‑98 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGAtcg                                                       >  1:3628044/1‑98 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTa                                                       >  1:1280217/1‑100 (MQ=255)

                              gAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATAGAATACACCTAAATCGGTTGTAAGGCA‑AAGAtcg                                                       >  1:4254898/1‑98 (MQ=255)

                               aaaGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAg                                                      >  1:1867145/1‑100 (MQ=255)

                                 aGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGc                                                    >  1:2598912/1‑100 (MQ=255)

                                   gtAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGa                                                  >  1:2729266/2‑100 (MQ=255)

                                     aaaGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGacc                                                <  1:600531/100‑3 (MQ=255)

                                        tgtAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAg                                             >  1:1625233/3‑100 (MQ=255)

                                        cctAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCAAACCAg                                             >  1:4014937/3‑100 (MQ=255)

                                          tAATGCGTTATATACAAATCTAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCGGaa                                           >  1:3444555/1‑100 (MQ=255)

                                          tAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaa                                           >  1:4344992/1‑100 (MQ=255)

                                          tAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaa                                           >  1:1736599/1‑100 (MQ=255)

                                          tAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaa                                           >  1:25849/1‑100 (MQ=255)

                                          caacgCGTTATATACAAATAAAAATATAATCACTTAAAAATCAAAATTTAAATATAATACACCTAAATCGGTTGTAAATCA‑AAGATTAGGCTAGCCAGaa                                           >  1:690505/5‑100 (MQ=255)

                                          caaTGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaa                                           >  1:1073372/2‑100 (MQ=255)

                                           aaTGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaaa                                          >  1:814816/1‑100 (MQ=255)

                                           aaTGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGaaa                                          >  1:505614/1‑100 (MQ=255)

                                           aaTGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTCGTAAGGCA‑AAGATTAGGCGAACCAGaaa                                          >  1:2711653/1‑100 (MQ=255)

                                             cccGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACa                                        >  1:3751054/3‑100 (MQ=255)

                                              gCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACag                                       >  1:1360238/1‑100 (MQ=255)

                                                  ttcctaCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGAt                                   >  1:5120897/5‑100 (MQ=255)

                                                   atataCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGAtt                                  >  1:1043000/1‑100 (MQ=255)

                                                   atataCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGAtt                                  >  1:4166996/1‑100 (MQ=255)

                                                     ataCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACagatcggaa                                >  1:3704707/1‑94 (MQ=255)

                                                     ataCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGt                                >  1:5110120/1‑100 (MQ=255)

                                                      taCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAgagaagatc                               >  1:4184403/1‑95 (MQ=255)

                                                       aCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAATTAGAGAtcggaa                              >  1:1066019/1‑95 (MQ=255)

                                                       aCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAGCAgagagatcgg                              >  1:3440511/1‑94 (MQ=255)

                                                       aCAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGAtaagat                              >  1:1617889/1‑95 (MQ=255)

                                                                    aaaTCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCg                 >  1:3677012/2‑100 (MQ=255)

                                                                     aaTCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGt                >  1:3303719/1‑100 (MQ=255)

                                                                     aaTCACTTCAAAATCAAAAATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGCagagatcgg                >  1:2566179/1‑95 (MQ=255)

                                                                           gtcaaaatcaaaaATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGaa          >  1:576461/2‑100 (MQ=255)

                                                                             caaaatcaaaaATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGAACa        >  1:1137528/1‑100 (MQ=255)

                                                                               aaatcaaaaATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGAACaaa      >  1:5275816/1‑100 (MQ=255)

                                                                                   caaaaATTAAATATAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGAACAAaataa  >  1:926659/1‑100 (MQ=255)

TTACAATAATTTTATAATGATAAGTTACATGAAAGATAAAGTTAATGCGTTATATACAAATCAAAATATAATCACTTCAAAATCAAAAATTAAATACAATACACCTAAATCGGTTGTAAGGCA‑AAGATTAGGCGAACCAGAAACAGAGATTGTTAAAGGTAGAGTGCGTTACGAACAAAATAA  >  NC_007793/1353932‑1354114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`