Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 1,286,986 A→G K222R (AAA→AGA)  SAUSA300_RS06325 → cell division protein FtsK

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077931,286,9860AG100.0% 328.0 / NA 117K222R (AAA→AGA) SAUSA300_RS06325cell division protein FtsK
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (117/0);  total (117/0)

Only 100 of 121 total aligned reads displayed.

GTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286889‑1287082
                                                                                                 |                                                                                                
tttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1161191/2‑100 (MQ=255)
tacccACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1010630/5‑100 (MQ=255)
ggtGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:1366659/3‑100 (MQ=255)
cttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:5171411/2‑100 (MQ=255)
cctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:4781761/3‑100 (MQ=255)
cctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGAGAAGAAAAAGCAAGAc                                                                                                >  1:5246256/3‑100 (MQ=255)
cctGCACTGGAAAATATAAAAGCTTGGGTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAc                                                                                                >  1:3393409/3‑100 (MQ=255)
 ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:1200059/1‑100 (MQ=255)
 ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:3311419/1‑100 (MQ=255)
 ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:565369/1‑100 (MQ=255)
 ttGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:4485102/1‑100 (MQ=255)
 ttGCACCGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGTAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:1782222/1‑100 (MQ=255)
 ctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:4547181/2‑100 (MQ=255)
 ctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:2194009/2‑100 (MQ=255)
 ctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:305954/2‑100 (MQ=255)
 ctGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACt                                                                                               >  1:4444827/2‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGAcga                                                                                              >  1:450334/1‑98 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:5414279/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:2479122/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:4384317/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:4243479/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:2709665/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtt                                                                                              >  1:1148953/1‑100 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtc                                                                                              >  1:732522/1‑99 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACtc                                                                                              >  1:131131/1‑99 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:514879/1‑99 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:5008275/1‑99 (MQ=255)
  tGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:3355877/1‑99 (MQ=255)
  ggCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACta                                                                                              >  1:3005925/2‑99 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAACAGCAAGACtag                                                                                             >  1:4357252/1‑98 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGGCTTa                                                                                             >  1:320740/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4576068/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3061559/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4453385/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:1633658/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3346216/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3380013/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:5177811/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:4503722/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:3733473/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACATa                                                                                             >  1:5116375/1‑100 (MQ=255)
   gCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGCGAAGAAAAAGCAAGACTTa                                                                                             >  1:2670680/1‑100 (MQ=255)
   gCACTGGAAAAGATAAAAGCGTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:1538536/1‑100 (MQ=255)
   acACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTa                                                                                             >  1:5232628/2‑100 (MQ=255)
     aCTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTaaaa                                                                                           >  1:4243711/1‑100 (MQ=255)
        ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:2944662/1‑100 (MQ=255)
        ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:1327650/1‑100 (MQ=255)
        ggAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAaagaa                                                                                        >  1:4390855/1‑100 (MQ=255)
                                     ttAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGcc                                                           >  1:3092433/1‑100 (MQ=255)
                                      ttaTGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAGAGAAGAACAAAAGGCACGTCAAAATGAACAGCca                                                          >  1:2722415/3‑100 (MQ=255)
                                      ccaTGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCca                                                          >  1:398083/3‑100 (MQ=255)
                                              taaTGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATaaa                                                  >  1:4794630/2‑100 (MQ=255)
                                                 ccgcGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGa                                               >  1:166999/4‑100 (MQ=255)
                                                        aagaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagt                                        >  1:2151281/1‑100 (MQ=255)
                                                        aagaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagt                                        >  1:4903191/1‑100 (MQ=255)
                                                         agaaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGGAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGGTgtgagat                                       >  1:49462/1‑98 (MQ=255)
                                                           gaaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGAGAt                                     >  1:2181337/2‑100 (MQ=255)
                                                            aaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATgtgagatcgg                                    >  1:3483906/1‑95 (MQ=255)
                                                            aaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAtt                                    >  1:3322925/1‑100 (MQ=255)
                                                            aaCCAAGAAAAACAATTGAAGCGTGAAGAAAAAGAAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGAtt                                    >  1:5084902/1‑100 (MQ=255)
                                                                 aGAAAAACAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACg                               >  1:1686961/1‑100 (MQ=255)
                                                                      gaCAATTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGt                          >  1:2036715/2‑100 (MQ=255)
                                                                         taTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGcc                       >  1:433131/2‑100 (MQ=255)
                                                                          aTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:5140462/1‑100 (MQ=255)
                                                                          aTTGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCt                      >  1:2550637/1‑100 (MQ=255)
                                                                           ttGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTc                     >  1:3624521/1‑100 (MQ=255)
                                                                           tgtgacgctGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTc                     >  1:3551384/9‑100 (MQ=255)
                                                                           acgacgCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTc                     >  1:1999397/6‑100 (MQ=255)
                                                                            tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:1702947/1‑100 (MQ=255)
                                                                            tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:2072255/1‑100 (MQ=255)
                                                                            tGAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:2214460/1‑100 (MQ=255)
                                                                            agAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCa                    >  1:1564358/2‑100 (MQ=255)
                                                                             gAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaa                   >  1:13767/1‑100 (MQ=255)
                                                                             gAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaa                   >  1:4539198/1‑100 (MQ=255)
                                                                             gAAGCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaa                   >  1:408789/1‑100 (MQ=255)
                                                                               tgCGTGAAGAAAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGGTGTGAGTGATTTTACGGAAGTGCCTCaaga                 >  1:1279637/2‑100 (MQ=255)
                                                                                  aacaggaaAAAGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCaagaaag              >  1:4938103/6‑100 (MQ=255)
                                                                                      acgaaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGat          >  1:3189158/4‑100 (MQ=255)
                                                                                        caaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:1163026/2‑100 (MQ=255)
                                                                                        aaaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatat        >  1:473088/1‑100 (MQ=255)
                                                                                         aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:3870772/1‑100 (MQ=255)
                                                                                         aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:1725134/1‑100 (MQ=255)
                                                                                         aaaaGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATAtt       >  1:3755890/1‑100 (MQ=255)
                                                                                            aGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatcggaag    >  1:1871157/1‑94 (MQ=255)
                                                                                            aGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCa    >  1:5425437/1‑100 (MQ=255)
                                                                                            aGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCa    >  1:5365140/1‑100 (MQ=255)
                                                                                            aGCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTGTACGGAAGTGCCTCGAGAAAGAGATATTCCa    >  1:1698246/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:86970/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:4764739/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:3492718/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:3465836/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:3155310/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:2970946/1‑100 (MQ=255)
                                                                                             gCAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:153678/1‑100 (MQ=255)
                                                                                             ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGatcggaaga   >  1:2888562/2‑93 (MQ=255)
                                                                                             ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:2909970/2‑100 (MQ=255)
                                                                                             ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:1539292/2‑100 (MQ=255)
                                                                                             ccAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGACGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCaa   >  1:3364538/2‑100 (MQ=255)
                                                                                              cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:3043775/1‑100 (MQ=255)
                                                                                              cAAGACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAt  >  1:582957/1‑100 (MQ=255)
                                                                                                 |                                                                                                
GTTGCACTGGAAAATATAAAAGCTTGGTTTGGTTCATTTAATGAAAAAATGTCGGAAAGAAACCAAGAAAAACAATTGAAGCGTGAAGAAAAAGCAAAACTTAAAGAAGAACAAAAGGCACGTCAAAATGAACAGCCACAAATAAAAGATGTGAGTGATTTTACGGAAGTGCCTCAAGAAAGAGATATTCCAAT  >  NC_007793/1286889‑1287082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑