Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,272,0180TG61.6% 69.2 / 139.3 125intergenic (‑18/‑663)SAUSA300_RS11600/SAUSA300_RS11605glutamine‑‑fructose‑6‑phosphate aminotransferase/pts system mannitol‑specific eiicb component
Reads supporting (aligned to +/- strand):  ref base T (4/44);  new base G (77/0);  total (81/44)
Fisher's exact test for biased strand distribution p-value = 1.59e-29
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.38e-07

Only 100 of 137 total aligned reads displayed.

CTGTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCATTCA  >  NC_007793/2271921‑2272115
                                                                                                    |                                                                                                 
ctGTGTTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATACAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑Cagat                                                                                                 >  1:2406470/1‑100 (MQ=255)
ctGTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑Catat                                                                                                 <  1:5405762/100‑1 (MQ=255)
ctGTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑Cagat                                                                                                 >  1:3742941/1‑100 (MQ=255)
ctGTACTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑Cagat                                                                                                 >  1:5265803/1‑100 (MQ=255)
ctGTACTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑Cagat                                                                                                 >  1:3228205/1‑100 (MQ=255)
  gcaTTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑CC‑Cagatcg                                                                                               >  1:4711615/3‑98 (MQ=255)
  gTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTCAC‑TC‑Cagatc                                                                                                >  1:2457020/1‑99 (MQ=255)
  gTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTg                                                                                               >  1:4694448/1‑100 (MQ=255)
  gTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑Cagatcg                                                                                               >  1:4583493/1‑98 (MQ=255)
  gTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑Cagatcg                                                                                               >  1:3877682/1‑98 (MQ=255)
  gTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑Cagatcg                                                                                               >  1:1823244/1‑98 (MQ=255)
    aTTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTggg                                                                                             <  1:277639/100‑2 (MQ=255)
    aTTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGa                                                                                             <  1:1303414/100‑1 (MQ=255)
      tCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAAt                                                                                           <  1:353798/100‑1 (MQ=255)
            gcatCTAAATCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑CAGATCGGAAGAGCAca                                                                                     >  1:1488492/4‑99 (MQ=255)
                cgaaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑CAGATCGGAAGAGCACACGtc                                                                                 >  1:586915/3‑99 (MQ=255)
                cTATACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑CAGATCGGAAGAGCACACGtc                                                                                 >  1:3538240/1‑99 (MQ=255)
                cTAGACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CT‑CAGATCGGAAGAGCACACGtc                                                                                 >  1:2119273/1‑99 (MQ=255)
                cTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAagagccacgtct                                                                                 >  1:46378/1‑92 (MQ=255)
                cTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑CC‑CAGATCGGAAGAGCACACGtc                                                                                 >  1:3428232/1‑99 (MQ=255)
                cTAAACCATTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtc                                                                                 >  1:4286285/1‑99 (MQ=255)
                 gtaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtct                                                                                >  1:1335033/3‑98 (MQ=255)
                  tggccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:768495/4‑97 (MQ=255)
                  taaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2436027/2‑97 (MQ=255)
                  gggccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1018517/4‑97 (MQ=255)
                  gaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1073476/2‑97 (MQ=255)
                  caaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑CC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4030580/2‑97 (MQ=255)
                  aggccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑TAGATCGGAAGAGCACACGtctg                                                                               >  1:2035152/4‑97 (MQ=255)
                  agaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑AC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2958015/3‑97 (MQ=255)
                  aagccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTT‑C‑TC‑GAGATCGGAAGAGCACACGtctg                                                                               >  1:3154918/4‑97 (MQ=255)
                  aagccTTTTAATAATAATTCCTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:3750820/4‑97 (MQ=255)
                  aacccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1563380/4‑97 (MQ=255)
                  aacccTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:318207/4‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTT‑C‑CC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2026252/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑G‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1460720/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑CATC‑CAGATCGGAAGAGCACACGtct                                                                                >  1:1229547/1‑98 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TCGCAGATCGGAAGAGCACACGtct                                                                                >  1:4578671/1‑98 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1829136/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:3296623/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:257241/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4472963/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1564667/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TA‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2986972/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑AAGATCGGAAGAGCACACGtctg                                                                               >  1:740504/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CC‑AAGATCGGAAGAGCACACGtctg                                                                               >  1:3918896/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑CA‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1693166/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑AC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4762824/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:3926859/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4078536/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:5414923/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑TA‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4142412/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:5498007/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1219572/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTCC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:5221148/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑TAGATCGGAAGAGCACACGtctg                                                                               >  1:2965882/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:949807/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2203802/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2348158/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2640388/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑CC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:2737363/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑AC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:1639094/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCATTAACATAGCCAATATAACCAACAATTCCACACATAACGACATTTCT‑C‑TC‑CAGACCGGAAGAGCACACGtctg                                                                               >  1:5472880/1‑97 (MQ=255)
                  aaaCCTTTTAATAATAATTCTTTGGCAGTATCATACCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:4685271/1‑97 (MQ=255)
                  aaaCCCTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CAGATCGGAAGAGCACACGtctg                                                                               >  1:592675/1‑97 (MQ=255)
                  aaaCCCTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTGC‑C‑CC‑CAGATCGGAAGAGCAcacctgaa                                                                               >  1:4882356/1‑93 (MQ=255)
                   aaCCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTAC‑C‑CC‑CAGATCGGAAGAGCACACGtctga                                                                              >  1:1794226/1‑96 (MQ=255)
                        tttAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATgt                                                                         <  1:3533775/100‑2 (MQ=255)
                        tttAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGa                                                                         >  1:2481220/1‑100 (MQ=255)
                                  atTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACTTTTTC‑C‑GC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCg                                                               <  1:1543542/100‑1 (MQ=255)
                                  atTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTgggg                                                               <  1:1873749/100‑4 (MQ=255)
                                  atTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCg                                                               <  1:3982962/100‑1 (MQ=255)
                                  atTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCg                                                               <  1:4941512/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:1653943/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:88171/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:1391771/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:1243078/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:100989/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:727302/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:3822043/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:315061/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:2848552/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:403549/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:2813653/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:4105675/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:441796/100‑1 (MQ=255)
                                         ggCATTATCATAGCCAATATAACCAACAACTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGGACGCGTAAATTATGATTTATTGCCGATAAttt                                                        <  1:5378421/100‑1 (MQ=255)
                                                     ggcAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATc                                            >  1:3154269/3‑100 (MQ=255)
                                                          tataACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCta                                       <  1:1973411/100‑2 (MQ=255)
                                                           ataACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCttt                                      <  1:2361479/100‑1 (MQ=255)
                                                              aCCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTgactaatt                                   <  1:3686931/100‑8 (MQ=255)
                                                                            acaTAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAggcg                     <  1:4651173/100‑3 (MQ=255)
                                                                             caTAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAAc                    <  1:33145/100‑1 (MQ=255)
                                                                             caTAACGACATTTTC‑C‑TC‑CATATTGGAATAGAACGCGTAAATTATGATTTATTGCCGGTAATTTTGATTGACAATCTGCTTTCATAATATAAATAGGAAc                    <  1:2286630/100‑1 (MQ=255)
                                                                                  cGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCt               <  1:4832313/100‑1 (MQ=255)
                                                                                          tc‑c‑tc‑cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGc       <  1:5263273/100‑1 (MQ=255)
                                                                                          tc‑c‑tc‑cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGc       <  1:669564/100‑1 (MQ=255)
                                                                                                c‑cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCAttg   <  1:4669557/100‑2 (MQ=255)
                                                                                                c‑cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCATTc   <  1:2385659/100‑1 (MQ=255)
                                                                                                c‑cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCATTc   <  1:4815959/100‑1 (MQ=255)
                                                                                                  cATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCATTCa  <  1:2265230/100‑1 (MQ=255)
                                                                                                    |                                                                                                 
CTGTATTCTAATTTTTCTAAACCTTTTAATAATAATTCTTTGGCATTATCATAGCCAATATAACCAACAATTCCACACATAACGACATTTTC‑C‑TC‑CATATTGGAATAGTACGCGTAAATTATGATTTATTGCCGATAATTTAGATTGACAATCTGCTTTCATAATATAAATAGGAACATGCTATCATCGCATTCA  >  NC_007793/2271921‑2272115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑