Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2788515	2788571	57	1 [0]	[0] 2	SAUSA300_RS14325	PTS mannose transporter subunit IIA

AACACACTTTTTGAAGCGATTGATAAATTAGCAATTGATACTGATATAGAGATGAGCGAAGATGAAATTGCATTTTTAACAATTCATTTTCAAGCTGCCAT  >  NC_007793/2788571‑2788671  |                                                                                                    cacacacTTTTTGAAGCGATTGATAAATTAGCAATTGATACTGATATAGAGATGAGCGAAGATGAAATTGCATTTTTAACAATTCATTTTCAAGCCGCCa   >  1:5348604/2‑100 (MQ=255)  acacacTTTTTGAAGCGATTGATAAATTAGCAATTGATACTGATATAGAGATGAGCGAAGATGAAATTGCATTTTTAACAATTCATTTTCAAGCTGCCAt  >  1:925123/1‑100 (MQ=255)  |                                                                                                    AACACACTTTTTGAAGCGATTGATAAATTAGCAATTGATACTGATATAGAGATGAGCGAAGATGAAATTGCATTTTTAACAATTCATTTTCAAGCTGCCAT  >  NC_007793/2788571‑2788671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑