Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2197941	2197952	12	1 [0]	[0] 1	SAUSA300_RS11200	histidine kinase

CAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTATTTCATAATGAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTGAAC  >  NC_007793/2197953‑2198052 |                                                                                                    cAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTATTTCATAATGAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTggat  <  1:3684082/100‑4 (MQ=255) |                                                                                                    CAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTATTTCATAATGAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTGAAC  >  NC_007793/2197953‑2198052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑