Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1565249	1565273	25	1 [0]	[0] 1	SAUSA300_RS07620	tail protein

CATCTTCCCATGTCATGCGTTTAACTACTTTTGTTGCTTCTGGGTTAAAAACTCCAACGTATAATCTTTTAAAACCTACTTTATAAGAACCTTGTCCTTC  >  NC_007793/1565274‑1565373 |                                                                                                    cATCTTCCCATGTCATGCGTTTAACTACTTTTGTTGCTTCTGGGTTAAAAACTCCAACGTATAATCTTTTAAAACCTACTTTATAAGAACCTTGTccccc  <  1:2275025/100‑4 (MQ=255) |                                                                                                    CATCTTCCCATGTCATGCGTTTAACTACTTTTGTTGCTTCTGGGTTAAAAACTCCAACGTATAATCTTTTAAAACCTACTTTATAAGAACCTTGTCCTTC  >  NC_007793/1565274‑1565373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑