Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1142383	1142402	20	1 [0]	[0] 1	SAUSA300_RS05620/SAUSA300_RS05625	thiol reductase thioredoxin/hypothetical protein

CAACCAGTTGATAAAGTTGTTGGTTTCCAACCAAAAGAAAACTTAGCTGAAGTTTTAGATAAACATTTATAAGTTACAACCAATGACGACTGGGGCATTT  >  NC_007793/1142293‑1142392                                                                                          |           cAACCAGTTGATAAAGTTGTTGGTTTCCAACCAAAAGAAAACTTAGCTGAAGTTTTAGATAAACATTTATAAGTTACAACCAATgacgaccgagatcgga  >  1:3543398/1‑90 (MQ=255)                                                                                          |           CAACCAGTTGATAAAGTTGTTGGTTTCCAACCAAAAGAAAACTTAGCTGAAGTTTTAGATAAACATTTATAAGTTACAACCAATGACGACTGGGGCATTT  >  NC_007793/1142293‑1142392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑