Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	988923	988962	40	1 [0]	[0] 1	SAUSA300_RS04850	competence protein CoiA

AGCCATTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTATTCGCCAATTCCTTATAAACAGATTCTT  >  NC_007793/988823‑988922                                                                                                    | agCCATTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTATTCGCCAATTCCTTATAAACAGAttctt  >  1:3238739/1‑100 (MQ=255)                                                                                                    | AGCCATTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTATTCGCCAATTCCTTATAAACAGATTCTT  >  NC_007793/988823‑988922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑