Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	861989	862028	40	1 [0]	[0] 1	SAUSA300_RS04165/SAUSA300_RS04170	clumping factor A/coagulase

AGGTTCATTACTACTTTTCAGAAGAAAAAAAGAAAATAAAGATAAGAAATAAGTAATAATGATATTAAATTAATCATATGATTCATGAAGAAGCCACCTT  >  NC_007793/861898‑861997                                                                                           |          aGGTTCATTACTACTTTTCAGAAGAAAAAAAGAAAATAAAGATAAGAAATAAGTAATAATGATATTAAATTAATCATATGATTCATgaagatcggaagag  >  1:5503970/1‑91 (MQ=255)                                                                                           |          AGGTTCATTACTACTTTTCAGAAGAAAAAAAGAAAATAAAGATAAGAAATAAGTAATAATGATATTAAATTAATCATATGATTCATGAAGAAGCCACCTT  >  NC_007793/861898‑861997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑