Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	48576	48584	9	1 [0]	[0] 1	SAUSA300_RS00205	recombinase RecA

AGCCCATTTCTGACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCAA  >  NC_007793/48476‑48575                                                                                                    | aGCCCATTTCTGACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCaa  >  1:3455531/1‑100 (MQ=255)                                                                                                    | AGCCCATTTCTGACTTGTTCTCCAATGTTATCCGATTCAAGTTCGGCTAAACTGATGAAGATATTAAGCTTGAGTCGGTCGAAAGCTTGATCCATATCAA  >  NC_007793/48476‑48575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑