Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	2199016	2199021	6	1 [0]	[0] 1	SAUSA300_RS11200	histidine kinase

GACTATCCTATTACATTTATCGTTAGCATTTTAACAAGTATTTTAACGAGTGCTTTATTAAAACAAATTAAATTCCAATACTCCATTACTAAAAAGCAAC  >  NC_007793/2198916‑2199015                                                                                                    | gACTATCCTATTACATTTATCGTTAGCATTTTAACAAGTATTTTAACGAGTGCTTTATTAAAACAAATTAAATTCCAATACTCCATTACTAAAAAGCAAc  >  1:1281583/1‑100 (MQ=255)                                                                                                    | GACTATCCTATTACATTTATCGTTAGCATTTTAACAAGTATTTTAACGAGTGCTTTATTAAAACAAATTAAATTCCAATACTCCATTACTAAAAAGCAAC  >  NC_007793/2198916‑2199015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑