Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1978075	1978087	13	2 [0]	[0] 1	SAUSA300_RS09820	hypothetical protein

ACACATTTATAACAGTTTAAAATTTTATTTGTAGCGTACGTTGATATTTTTCAAAAATTTCAGTCGGAAATGCAATTTCCGTAGTTATTAACACCGCTAG  >  NC_007793/1977975‑1978074                                                                                                    | acacATTTATAACAGTTTAAAATTTTATTTGTAGCGTACGTTGATATTTTTCAAAAATTTCAGTCGGAAATGCAATTTCCGTAGTTATTAACACCGCTAg  >  1:123459/1‑100 (MQ=255) acacATTTATAACAGTTTAAAATTTTATTTGTAGCGTACGTTGATATTTTTCAAAAATTTCAGTCGGAAATGCAATTTCCGTAGTTATTAACACCGCTAg  <  1:5526390/100‑1 (MQ=255)                                                                                                    | ACACATTTATAACAGTTTAAAATTTTATTTGTAGCGTACGTTGATATTTTTCAAAAATTTCAGTCGGAAATGCAATTTCCGTAGTTATTAACACCGCTAG  >  NC_007793/1977975‑1978074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑