Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_007793	1554178	1554289	112	1 [0]	[0] 1	SAUSA300_RS07580	minor structural protein

AGGTCTTAAACGACTTAGCATATAGCCATTATTTCTAGCTTGTGTCATGTATACTATGCCTGTTCTATTATCAAACCAGAAGGATTGCATTACTGCATTT  >  NC_007793/1554078‑1554177                                                                                                    | aGGTCTTAAACGACTTAGCATATAGCCATTATTTCTAGCTTGTGTCATGTATACTATGCCTGTTCTATTATCAAACCAGAAGGATTGCATTACTGCAttt  <  1:4409374/100‑1 (MQ=255)                                                                                                    | AGGTCTTAAACGACTTAGCATATAGCCATTATTTCTAGCTTGTGTCATGTATACTATGCCTGTTCTATTATCAAACCAGAAGGATTGCATTACTGCATTT  >  NC_007793/1554078‑1554177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑