| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,099,213 | 2 bp→CA | coding (2094‑2095/4530 nt) | SAUSA300_RS10590 ← | phage tail tape measure protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,099,213 | 0 | T | C | 100.0% | 13.3 / NA | 7 | T699A (ACT→GCT) | SAUSA300_RS10590 | phage tail tape measure protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/5); total (2/5) | |||||||||||
| * | NC_007793 | 2,099,214 | 0 | T | A | 100.0% | 14.2 / NA | 7 | G698G (GGA→GGT) | SAUSA300_RS10590 | phage tail tape measure protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (2/5); total (2/5) | |||||||||||
CTCGCCAATCTCCAGTAAATAAACTTGAGAAGAACTTAATTAAACCTAGTATGATATTTAAAGTTCCTTGTATCACACCTTTTATATTCTCCCAAGTACTGACAATCAAGGCTTTAACCGCCGGCCAAATAAATTGCATCA > NC_007793/2099150‑2099290 || ctcGCCAATTACCAGTGAATAAACTTGAAAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACt > 1:5863472/1‑100 (MQ=255) tcGCCAGTTACCAGTGAATAAACTTGAAAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTg < 1:2735956/100‑1 (MQ=255) tcGCCAATTACCAGTGAATAAACTTGAAAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTg < 1:6060518/100‑1 (MQ=255) gCCAATTACCAGTGAATAAACTTGAGAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTGAc < 1:6431194/100‑1 (MQ=255) attaccAGTGAATAAACTTGAAAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTGACAATc < 1:1275287/96‑1 (MQ=255) gtaccAGTGAATAAACTTGAAAAGAACTTAATAAAGCCAAGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTGACAATCa > 1:3349795/4‑100 (MQ=255) aagccaaGTATTATATTTAAAGCACCTTGTATTACTCCTTTTATATTCTCCCAAGTACTGACAATCAAGGCTTTAACCGCCGGCCAAATAAATTGCATCa < 1:6531184/94‑1 (MQ=255) || CTCGCCAATCTCCAGTAAATAAACTTGAGAAGAACTTAATTAAACCTAGTATGATATTTAAAGTTCCTTGTATCACACCTTTTATATTCTCCCAAGTACTGACAATCAAGGCTTTAACCGCCGGCCAAATAAATTGCATCA > NC_007793/2099150‑2099290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |