| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 1,579,527 | 2 bp→TG | coding (299‑300/537 nt) | SAUSA300_RS07730 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 1,579,527 | 0 | A | T | 100.0% | 15.8 / NA | 8 | S100R (AGT→AGA) | SAUSA300_RS07730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (0/8); total (0/8) | |||||||||||
| * | NC_007793 | 1,579,528 | 0 | C | G | 100.0% | 15.4 / NA | 8 | S100T (AGT→ACT) | SAUSA300_RS07730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (0/8); total (0/8) | |||||||||||
ACAACTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATGTTGTGAAATTCACTATTTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCAATCCAAACGCCAACATGTC > NC_007793/1579471‑1579619 || gatctcgCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATctctcaca < 1:1498403/94‑5 (MQ=255)cgatcTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCtg < 1:4507278/96‑1 (MQ=255)acaacTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCtg < 1:1751356/100‑1 (MQ=255) ctgcggTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCtgatg < 1:6548275/95‑1 (MQ=255) ctttatctttaAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCgt < 1:2438980/100‑2 (MQ=255) tttatctttaAAATTAAACATTTTGTGAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCa < 1:920560/100‑1 (MQ=255) gAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCAATCCAAACGCCAACATGta < 1:4266220/100‑2 (MQ=255) gAAATTCTGTATCTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCAATCCAAACGCCAACATGTc < 1:6201679/100‑1 (MQ=255) || ACAACTGCGTCTTGAGCAAATTCTTTATCTTTAAAATTAAACATGTTGTGAAATTCACTATTTTTAAAACTTGATTCAATCGCTTCTTTTATCTCTTCTGATGACACTCCTACTTGATTCGCAATACTCAATCCAAACGCCAACATGTC > NC_007793/1579471‑1579619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |