D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	595,026	C→T	P200P (CCC→CCT)	fusA →	elongation factor G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	595,026	0	C	T	99.4%	923.0 / ‑5.5	319	P200P (CCC→CCT)	fusA	elongation factor G
Reads supporting (aligned to +/- strand): ref base C (2/0); new base T (237/80); total (239/80)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.27e-01

Only 100 of 319 total aligned reads displayed.

CGGAAGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCCGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTGGTGAC  >  NC_007793/594929‑595122

cGGAAGACGAATTCGAAGCAATCATTGACTTATTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGa                                                                                                <  1:4787860/100‑1 (MQ=255)

cGGAAGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGa                                                                                                <  1:1244925/100‑1 (MQ=255)

    aGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGat                                                                                            >  1:1091373/1‑99 (MQ=255)

    aGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAc                                                                                            >  1:778190/1‑100 (MQ=255)

    aGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAc                                                                                            >  1:3624214/1‑100 (MQ=255)

    aGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAc                                                                                            >  1:3643267/1‑100 (MQ=255)

     tgcGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAcc                                                                                           >  1:4001948/3‑100 (MQ=255)

     tccGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAcc                                                                                           >  1:635555/3‑100 (MQ=255)

      aCGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGATCa                                                                                          >  1:1627720/1‑100 (MQ=255)

      aCGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCa                                                                                          >  1:3305297/1‑100 (MQ=255)

      aCGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCa                                                                                          >  1:3748889/1‑100 (MQ=255)

      aCGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATCCCTGAAGatcg                                                                                          >  1:3898403/1‑97 (MQ=255)

       cGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGGAATTCCTGAAGACCAc                                                                                         >  1:129963/1‑100 (MQ=255)

        gAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACt                                                                                        <  1:2324872/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACGAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:428977/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCAcct                                                                                       <  1:5075085/100‑3 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:4080336/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:4215464/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:940771/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:4624343/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:6207258/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:655512/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:3556065/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:6629561/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:309374/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:2962317/100‑1 (MQ=255)

         aaTTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACtt                                                                                       <  1:2797848/100‑1 (MQ=255)

            tCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtaga                                                                                    >  1:6443215/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATGCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCGCTtagat                                                                                   <  1:2269817/100‑1 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGAcacagatcgg                                                                                   >  1:4670730/1‑91 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagat                                                                                   >  1:3855672/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagat                                                                                   >  1:2935455/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagat                                                                                   >  1:836584/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagat                                                                                   >  1:3246398/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagat                                                                                   >  1:6387454/1‑100 (MQ=255)

             cGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTAAAGACCACTtagat                                                                                   >  1:4851016/1‑100 (MQ=255)

                      ccctGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGATCGgaa                                                                          >  1:5996425/4‑100 (MQ=255)

                      cATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTtagatcggaagagc                                                                          >  1:3979162/1‑91 (MQ=255)

                      cATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaa                                                                          >  1:4715892/1‑100 (MQ=255)

                       aTTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACCgagatcggaagagca                                                                         >  1:3061455/1‑90 (MQ=255)

                       aTTGACTTAGTTGAAATGAAACGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACGCAGATAGATCGgaag                                                                         >  1:3009832/1‑100 (MQ=255)

                        ttGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCGCTTAGATAGAGCTgaaga                                                                        <  1:1888742/100‑1 (MQ=255)

                        ttGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaaga                                                                        >  1:4047911/1‑100 (MQ=255)

                         tGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaagaa                                                                       >  1:211988/1‑100 (MQ=255)

                         tGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaagaa                                                                       >  1:5909917/1‑100 (MQ=255)

                         tGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaagaa                                                                       >  1:1827575/1‑100 (MQ=255)

                         tGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaagaa                                                                       >  1:4491043/1‑100 (MQ=255)

                         tGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTgaagaa                                                                       >  1:5778934/1‑100 (MQ=255)

                                          aatgTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTaca                                                      <  1:5339173/100‑3 (MQ=255)

                                                tCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATTGAAGc                                                <  1:3115970/100‑1 (MQ=255)

                                                      ataCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGTAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGc                                          >  1:5896479/1‑100 (MQ=255)

                                                      ataCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGc                                          >  1:2704060/1‑100 (MQ=255)

                                                      ataCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGc                                          <  1:4897/100‑1 (MQ=255)

                                                      ataCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGc                                          >  1:5792291/1‑100 (MQ=255)

                                                        aCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAg                                        >  1:3836963/1‑100 (MQ=255)

                                                        aCAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAg                                        >  1:2368262/1‑100 (MQ=255)

                                                         cAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAgatcggaa                                       >  1:1372492/1‑93 (MQ=255)

                                                                 ttAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:5649247/1‑100 (MQ=255)

                                                                 ttAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:511004/1‑100 (MQ=255)

                                                                 ttAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:4440525/1‑100 (MQ=255)

                                                                 ttAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:5862670/1‑100 (MQ=255)

                                                                 ttAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:2170552/1‑100 (MQ=255)

                                                                 gtAGGCACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcg                               >  1:291454/2‑100 (MQ=255)

                                                                 ctAGGTACTGAAATTGAAGAAATTGACATTCCTGAAGACCCCTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATAGAAGCAGTTGCAGAAACTAGcg                               >  1:809308/2‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGTAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:1108489/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCATTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:5185771/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGTGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:6490956/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGatcggaagag                              >  1:3369384/1‑91 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:614598/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:1011412/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:2442895/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:1798287/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGAGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:1482919/1‑100 (MQ=255)

                                                                  tAGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTCAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:4126166/1‑100 (MQ=255)

                                                                  caGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcga                              >  1:5431322/2‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:5275524/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:5507804/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:1955325/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:4753284/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:6243424/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:1571267/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTACcgac                             >  1:283898/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTACAGAAACTAGcgac                             >  1:4947900/1‑100 (MQ=255)

                                                                   aGGTACTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCCGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:6289864/1‑100 (MQ=255)

                                                                   aGGTAATGAAATTGAAGAAATTGAAATTCCTGAAGAATACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGcgac                             >  1:1694285/1‑100 (MQ=255)

                                                                       gcTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAAt                         >  1:6090179/2‑100 (MQ=255)

                                                                       aCTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAAt                         >  1:2667184/1‑100 (MQ=255)

                                                                       aCTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAAt                         >  1:1778157/1‑100 (MQ=255)

                                                                       aCTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGATGCAGAAACTAGCGACGAAt                         >  1:377911/1‑100 (MQ=255)

                                                                        cTGAAATTGAAGAAATTGAAATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAAtt                        >  1:4426428/1‑100 (MQ=255)

                                                                          gaaattgaagaaattgaaATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTaa                      >  1:4139183/1‑100 (MQ=255)

                                                                          gaaattgaagaaattgaaATTCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTaa                      >  1:1325736/1‑100 (MQ=255)

                                                                                       atgaaattCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAatatat         >  1:2713778/2‑98 (MQ=255)

                                                                                        tgaaattCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCtt        <  1:3451919/100‑1 (MQ=255)

                                                                                         caaattCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTg       >  1:3709847/2‑100 (MQ=255)

                                                                                          cccttCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAatacaaaga      >  1:4389449/4‑94 (MQ=255)

                                                                                           atttCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGAAAAAATATCTTGGt     >  1:4828282/3‑100 (MQ=255)

                                                                                            attCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTGGTg    <  1:596467/100‑1 (MQ=255)

                                                                                              tCCTGAAGACCACTTAGATAGAGCTGAAGAAGTTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTGGTGAc  >  1:5587010/1‑100 (MQ=255)

                                                                                              tCCTGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTGGTGAc  >  1:4259496/1‑100 (MQ=255)

CGGAAGACGAATTCGAAGCAATCATTGACTTAGTTGAAATGAAATGTTTCAAATATACAAATGATTTAGGTACTGAAATTGAAGAAATTGAAATTCCCGAAGACCACTTAGATAGAGCTGAAGAAGCTCGTGCTAGCTTAATCGAAGCAGTTGCAGAAACTAGCGACGAATTAATGGAAAAATATCTTGGTGAC  >  NC_007793/594929‑595122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`