D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	555,081	C→T	I310I (ATC→ATT)	SAUSA300_RS02660 →	lysine‑‑tRNA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	555,081	0	C	T	99.8%	1804.0 / NA	614	I310I (ATC→ATT)	SAUSA300_RS02660	lysine‑‑tRNA ligase
Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (597/16); total (598/16)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01

Only 100 of 619 total aligned reads displayed.

TATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATCGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAG  >  NC_007793/554986‑555175

  acATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGACGTGTTAGGTTCTGCAAAAGTACAATACACTGGGGAAACGATTGATTTa                                                                                          >  1:4062930/2‑100 (MQ=255)

   cATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGAtttgg                                                                                         >  1:1362126/1‑98 (MQ=255)

    ctGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGa                                                                                        >  1:3778165/2‑100 (MQ=255)

     tGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGaa                                                                                       >  1:5343946/1‑100 (MQ=255)

                  gtAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTc                                                                          >  1:1216056/2‑100 (MQ=255)

                           tgtATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCata                                                                 >  1:4311271/3‑100 (MQ=255)

                            cTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCatat                                                                >  1:1005409/1‑100 (MQ=255)

                             caTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAtt                                                               >  1:3182734/2‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTCGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:6624499/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:921694/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:2729452/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:3961914/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:4654664/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:4722690/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5428419/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1918941/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1091308/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:784781/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:5595021/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:6288712/1‑100 (MQ=255)

                              aTGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGACTTAGAATCTGCTTGGACTCGTTTGCATAttg                                                              >  1:1317233/1‑100 (MQ=255)

                                   gagaCATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGAt                                                         >  1:2375431/1‑100 (MQ=255)

                                         tatTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTa                                                   >  1:3571579/1‑100 (MQ=255)

                                          cttGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:1285538/2‑100 (MQ=255)

                                          atTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:3688529/1‑100 (MQ=255)

                                          atTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:3286598/1‑100 (MQ=255)

                                          atTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:2063909/1‑100 (MQ=255)

                                          atTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGAACTCGTTTGCATATTGTTGATGCTGTaa                                                  >  1:5991336/1‑100 (MQ=255)

                                           ttGTCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaa                                                 <  1:1400489/100‑1 (MQ=255)

                                           gtGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaa                                                 >  1:5555169/2‑100 (MQ=255)

                                           ctGCCAATGAAGTGTTAGGTTCTGCAAAAGCACAACACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaa                                                 >  1:1693877/2‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:3490284/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:3632217/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:3814594/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:4196018/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:4270345/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:6207527/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:5943310/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:5479086/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:5813342/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:1039951/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:2208859/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:2130331/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:2623919/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:28282/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:2965331/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTATTGATGCTGTaaaa                                                >  1:4938491/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCGGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:4614568/1‑100 (MQ=255)

                                            tGCCAATGAAGTGTTAGGTTCCGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:161559/1‑100 (MQ=255)

                                            gtccAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTaaaa                                                >  1:6107314/3‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCGTATTGTTGATGCTGTAAaag                                               >  1:5210022/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGTTGCTGTAAaag                                               >  1:178635/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:649856/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:5370474/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:3427156/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:2505130/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:1669843/1‑100 (MQ=255)

                                             gCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaag                                               >  1:3059679/1‑100 (MQ=255)

                                              ccAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaaga                                              >  1:707410/1‑100 (MQ=255)

                                               cAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAaagaa                                             >  1:5129857/1‑100 (MQ=255)

                                                       tcttAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTgg                                     >  1:5885154/3‑100 (MQ=255)

                                                          tccgatCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGgtgt                                  <  1:6459024/95‑1 (MQ=255)

                                                          tAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGgtgt                                  >  1:5500982/1‑100 (MQ=255)

                                                          tAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATTAATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGgtgt                                  >  1:6371997/1‑100 (MQ=255)

                                                             cttCTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGACGCTACTGGTGTAGa                               >  1:5000795/2‑100 (MQ=255)

                                                               ccTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtt                             >  1:5263840/2‑100 (MQ=255)

                                                                cTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttt                            >  1:3527049/1‑100 (MQ=255)

                                                                cTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtcg                            >  1:3094167/1‑98 (MQ=255)

                                                                cTGCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCCgtgttagatc                            >  1:2536264/1‑94 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:5038418/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:624448/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:2920249/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:4797362/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:564644/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:1842054/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:1974240/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:4397626/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAttttt                          >  1:2366044/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtcttt                          >  1:4902996/1‑100 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGAtcgga                          >  1:5842837/1‑96 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGGTGTAGAtcgga                          >  1:763879/1‑96 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACCGGTGTAGAtcgga                          >  1:1159992/1‑96 (MQ=255)

                                                                  gCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCGGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGAGTAGAttttt                          >  1:4541425/1‑100 (MQ=255)

                                                                     aaaGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGCTTTTTATg                       >  1:2451231/1‑100 (MQ=255)

                                                                           caatacaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTa                 >  1:4475020/1‑100 (MQ=255)

                                                                               acaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAg             >  1:1550831/1‑100 (MQ=255)

                                                                               acaatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTCAAAAg             >  1:2567631/1‑100 (MQ=255)

                                                                                caatGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAgg            >  1:277297/1‑99 (MQ=255)

                                                                                 cgtGGGGAGACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtg           >  1:1512030/3‑100 (MQ=255)

                                                                                 catGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtg           >  1:3903361/2‑100 (MQ=255)

                                                                                 catGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGATAAAAgat           >  1:1468539/2‑98 (MQ=255)

                                                                                 catGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGCAGATTTTTATGAAGTTAAAAGtg           >  1:5748863/2‑100 (MQ=255)

                                                                                  gtGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtga          >  1:861081/2‑100 (MQ=255)

                                                                                  atGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtga          >  1:2248458/1‑100 (MQ=255)

                                                                                   tGGGGAAACGATTGATTTAGAATCTGCTTGGAATCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGAGTAGATTTTTATGAAGTTAAAAGtgat         >  1:3354913/1‑100 (MQ=255)

                                                                                    ggggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtgatg        >  1:5707162/1‑100 (MQ=255)

                                                                                    ggggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGCCAAAAgatcgg        >  1:3253172/1‑95 (MQ=255)

                                                                                     gggAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGtgatgc       <  1:2322499/100‑2 (MQ=255)

                                                                                         aaCGATTGCTTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATgacgaa   >  1:6069920/1‑100 (MQ=255)

                                                                                         aaCGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATgaagaa   >  1:265108/1‑100 (MQ=255)

TATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTGTTAGGTTCTGCAAAAGTACAATACAATGGGGAAACGATCGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGAAGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAG  >  NC_007793/554986‑555175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`