D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	542,171	T→C	I293I (ATT→ATC)	SAUSA300_RS02590 →	stage V sporulation protein B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	542,171	0	T	C	100.0%	301.0 / NA	114	I293I (ATT→ATC)	SAUSA300_RS02590	stage V sporulation protein B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/12); total (102/12)

Only 100 of 114 total aligned reads displayed.

CTATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATTAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCAGGAATAGGATTAATTA  >  NC_007793/542081‑542265

cTATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaat                                                                                       >  1:3801703/1‑100 (MQ=255)

 tATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaata                                                                                      >  1:5587530/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGGTTGCTTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:3093544/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGCTTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4668884/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCGTTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1346790/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCGATCAAAATGaataa                                                                                     >  1:4830794/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAGTGaatag                                                                                     >  1:2820462/1‑99 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:4545254/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:2511572/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:565943/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1961511/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1961153/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:1829739/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:745356/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:3989908/1‑100 (MQ=255)

  aTGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTCTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:2781010/1‑100 (MQ=255)

  aTGACCGTGGCGCATCATTTATTCAGATGGGATTGATTGTAAATACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataa                                                                                     >  1:427392/1‑100 (MQ=255)

   ttcccGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGaataat                                                                                    >  1:5101371/4‑100 (MQ=255)

    gACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATc                                                                                   >  1:2758198/1‑100 (MQ=255)

     tccGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCa                                                                                  >  1:2893730/2‑100 (MQ=255)

     cccGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCa                                                                                  >  1:1200210/2‑100 (MQ=255)

     aCCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCa                                                                                  >  1:4733397/1‑100 (MQ=255)

        gtggtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGt                                                                               <  1:882103/100‑1 (MQ=255)

        gtggtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGt                                                                               <  1:1258828/100‑1 (MQ=255)

         tggtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTa                                                                              >  1:4209513/1‑100 (MQ=255)

          ggtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGGCGCAATCAAAATGAATAATCAGGTAc                                                                             >  1:2598391/1‑100 (MQ=255)

          cgtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTAc                                                                             >  1:4802723/2‑100 (MQ=255)

           gtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACt                                                                            >  1:5247830/1‑100 (MQ=255)

           gtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACt                                                                            >  1:850589/1‑100 (MQ=255)

           gtgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACt                                                                            >  1:3294321/1‑100 (MQ=255)

            tgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACtt                                                                           >  1:1594796/1‑100 (MQ=255)

            tgCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACtt                                                                           >  1:3650632/1‑100 (MQ=255)

             gCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTa                                                                          <  1:3277254/100‑1 (MQ=255)

             gCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTa                                                                          >  1:1834726/1‑100 (MQ=255)

             gCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAACAACCAgatcggaa                                                                          >  1:4376557/1‑93 (MQ=255)

                 catTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGaa                                                                      >  1:5961778/1‑100 (MQ=255)

                     tATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGt                                                                  >  1:4656200/1‑100 (MQ=255)

                        tCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTAt                                                               >  1:6028663/1‑100 (MQ=255)

                        tCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTAt                                                               >  1:4908876/1‑100 (MQ=255)

                        tCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTAt                                                               >  1:383654/1‑100 (MQ=255)

                        tCAGATGGGATTGATTGCAACTACAACATTTAGTTTTCCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGACTAATCAGGTACTTATCAATCGTTAt                                                               >  1:5839803/1‑100 (MQ=255)

                         cAGATGGGATTGATTGTAACTACAACATTTTGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:4616087/1‑100 (MQ=255)

                         cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:4870537/1‑100 (MQ=255)

                         cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:6251734/1‑100 (MQ=255)

                         cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:5458428/1‑100 (MQ=255)

                         cAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:4220773/1‑100 (MQ=255)

                         cAGAGGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATg                                                              >  1:1192142/1‑100 (MQ=255)

                          aGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGc                                                             >  1:3611896/1‑100 (MQ=255)

                            ttGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCaa                                                           >  1:6156455/2‑100 (MQ=255)

                                       tgTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTa                                                >  1:2118642/1‑100 (MQ=255)

                                        gTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTaa                                               >  1:4443783/1‑100 (MQ=255)

                                        gTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTaa                                               <  1:2704599/100‑1 (MQ=255)

                                         tAACTACACCATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAACATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTaaa                                              >  1:3849304/1‑100 (MQ=255)

                                          aaCTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAg                                             >  1:476233/1‑100 (MQ=255)

                                          aaCTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAg                                             >  1:253986/1‑100 (MQ=255)

                                             tACAACATTTAGTTTTGCGCTCATTCCTCTGTTATGGGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGAtt                                          >  1:6632508/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:4509205/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:1362184/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:6191898/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:5857002/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:189469/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:2342596/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:244156/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:5143082/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:5072260/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:4553333/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:4793521/1‑100 (MQ=255)

                                              acaacaTTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTa                                         >  1:3916881/1‑100 (MQ=255)

                                                                  cATTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagca                     >  1:6018700/1‑100 (MQ=255)

                                                                   aTTCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcgg                    >  1:1691801/1‑98 (MQ=255)

                                                                    ttCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcaac                   >  1:5352850/1‑98 (MQ=255)

                                                                    atCCCCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcggc                   >  1:5391382/2‑100 (MQ=255)

                                                                    aaccggtGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcggc                   >  1:1798600/7‑100 (MQ=255)

                                                                     tccgatcttAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcg                  <  1:4649257/93‑2 (MQ=255)

                                                                     taccctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcg                  >  1:5485134/5‑99 (MQ=255)

                                                                     tCCTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagctgcg                  >  1:2084735/1‑99 (MQ=255)

                                                                     cgatctGTT‑AGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 <  1:479963/97‑3 (MQ=255)

                                                                      ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagctgcgg                 >  1:5880619/1‑98 (MQ=255)

                                                                      ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcggcgg                 >  1:6346983/1‑98 (MQ=255)

                                                                      ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcgg                 >  1:4049142/1‑98 (MQ=255)

                                                                      ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcga                 <  1:354265/100‑3 (MQ=255)

                                                                      ccTCTGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcaacgg                 >  1:1296153/1‑96 (MQ=255)

                                                                      actctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagcag                 >  1:301796/2‑100 (MQ=255)

                                                                        tctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGa               <  1:5091871/100‑1 (MQ=255)

                                                                         ttGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGCTTTTAATAAGTAcaacagcgagat              >  1:5947203/2‑95 (MQ=255)

                                                                         ctGTTAAGTGGCGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGag              >  1:1634194/1‑99 (MQ=255)

                                                                         ctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGag              >  1:6103576/1‑99 (MQ=255)

                                                                         ctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaa              >  1:1444868/1‑100 (MQ=255)

                                                                         ctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaa              >  1:6453206/1‑100 (MQ=255)

                                                                         ctGTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGaa              >  1:5030183/1‑100 (MQ=255)

                                                                           gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcagcagtgggagat            >  1:2820818/1‑92 (MQ=255)

                                                                           gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCCGCGGGagat            >  1:1345501/1‑97 (MQ=255)

                                                                           gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCATCGGGagat            >  1:851635/1‑97 (MQ=255)

                                                                           gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGagat            >  1:5490022/1‑97 (MQ=255)

                                                                           gTTAAGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGagat            >  1:333250/1‑97 (MQ=255)

                                                                            ttctacgACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTAGGCAAATGCGTCATTAAAGAGTACGATTTTAATAAGTACAGCAGCCGGagatc           >  1:4363021/7‑96 (MQ=255)

                                                                              aaGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTAcaacagcgagatcggaa         >  1:4164011/1‑90 (MQ=255)

                                                                              aaGTGACGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAACAGCAGGagatcgg         >  1:4942279/1‑94 (MQ=255)

                                                                                    cGCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGAATAGGattaatt   <  1:5645995/100‑1 (MQ=255)

                                                                                     gCAATCAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCGGGAATAGGattaatta  <  1:911076/100‑1 (MQ=255)

CTATGACCGTGGTGCATCATTTATTCAGATGGGATTGATTGTAACTACAACATTTAGTTTTGCGCTCATTCCTCTGTTAAGTGACGCAATTAAAATGAATAATCAGGTACTTATGAATCGTTATGCAAATGCGTCATTAAAGATTACGATTTTAATAAGTACAGCAGCAGGAATAGGATTAATTA  >  NC_007793/542081‑542265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`