| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,841,262 | G→T | A234D (GCT→GAT) | SAUSA300_RS14530 ← | polysaccharide deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,841,262 | 0 | G | T | 100.0% | 50.3 / NA | 19 | A234D (GCT→GAT) | SAUSA300_RS14530 | polysaccharide deacetylase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (5/14); total (5/14) | |||||||||||
TACCTTCTAAAGATGTTTTTTCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCAGCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTAAAGCAACAACACCTTT > NC_007793/2841167‑2841356 | tACCTTCTAAAGATGTTTTTTCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTgg < 1:1703243/100‑2 (MQ=255) ccTTCTAAAGATGTTTTTTCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCt < 1:2599902/100‑1 (MQ=255) cTTCTAAAGATGTTTTTTCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCtt < 1:3635403/100‑1 (MQ=255) aaaGATGTTTTTTCAAAAGTAATGTGACCATATGAATGACTCGCCAATGTCCATCCATCCCGTTTCATTGCACGAACAACTTCCTCATCTGCCTTTTTag < 1:4110520/100‑2 (MQ=255) ttCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATaa > 1:430494/1‑100 (MQ=255) tgtgcATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTa > 1:1245893/5‑100 (MQ=255) cTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGAt < 1:819941/100‑1 (MQ=255) cTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGAt < 1:2070072/100‑1 (MQ=255) ccatccCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGccca > 1:155191/1‑99 (MQ=255) atccCGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCtag > 1:693888/1‑98 (MQ=255) agcccGTTTCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGCATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCa > 1:1236019/3‑100 (MQ=255) tCATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATGCATTCGTGCGATAACCTAATACGCCCTCATAACCggg < 1:1469092/100‑2 (MQ=255) cATTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGta < 1:5590694/100‑2 (MQ=255) aTTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCgcata < 1:2368735/100‑5 (MQ=255) aTTGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTa < 1:5176485/100‑1 (MQ=255) ttGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATGCGCCCTCATAACCGGTTaa < 1:2949981/100‑1 (MQ=255) ttGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTaa < 1:3568634/100‑1 (MQ=255) ttGCGCGAACAACTTCCTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTaa < 1:1775797/100‑1 (MQ=255) ccTCATCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTAAAGCAACAACACCttc < 1:3316627/100‑2 (MQ=255) | TACCTTCTAAAGATGTTTTTTCAAAATTAATGTGACCATATGAATGACTCGCAAATGACCATCCATCCCGTTTCATTGCGCGAACAACTTCCTCAGCTGCCTTTTTATTCTTTGTATAATCTTTACTCGTTAATTCATTCGTGCGATAACCTAATACGCCCTCATAACCGGTTAAAGCAACAACACCTTT > NC_007793/2841167‑2841356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |