| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,740,597 | G→A | G412S (GGT→AGT) | SAUSA300_RS14085 → | amino acid permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,740,597 | 0 | G | A | 100.0% | 15.8 / NA | 8 | G412S (GGT→AGT) | SAUSA300_RS14085 | amino acid permease |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (6/2); total (6/2) | |||||||||||
ATGTTCCCATTCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAGGTAAAGATCTACCAATTCCTGCATTTAAATTACCTTTATATCCTGTGTTACCAGCAATTACATTTGTTTTAGTATTGCTAGTATTCTGGGGATT > NC_007793/2740498‑2740691 | aTGTTCCCATTCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCACTAGCAATGTATCGTTTGAGAAAGCGTGAAg > 1:6250577/1‑100 (MQ=255) cccccATTCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAgatc > 1:3833205/3‑97 (MQ=255) ccgatctCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTaa < 1:4130188/94‑1 (MQ=255) ccccATTCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTaa < 1:940957/99‑1 (MQ=255) tAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTAAAGATcggaagagcac > 1:6036278/1‑90 (MQ=255) tCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTAAAGATCTACCAATTCCTGCATTTAAATTAc > 1:6237826/1‑100 (MQ=255) cgcagGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTAAAGATCTACCAATTCCTGCATTTAAATTACCt > 1:3861457/2‑100 (MQ=255) cgcagGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTAAAGATCTACCAATTCCTACATTTAAATTACCt > 1:4871316/2‑100 (MQ=255) ttgttgCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAAGTAAAGATCTACCAATTCCTGCATTTAAATTACCTTTATATCCtgt > 1:852999/1‑100 (MQ=255) gTGAAAGTAAAGATCTACCAATTCCTGCATTTAAATGACCTTTAAATCCTGTGTTACCAGCAATTACATTTGGTTTAGTATTGCTAGTATTCTggggtta > 1:5435039/1‑97 (MQ=255) | ATGTTCCCATTCGCATTTTTAGCACAATTAATTTCAGCAGGTACACTTGTTGCATTTATGTTCGTTTCATTAGCAATGTATCGTTTGAGAAAGCGTGAAGGTAAAGATCTACCAATTCCTGCATTTAAATTACCTTTATATCCTGTGTTACCAGCAATTACATTTGTTTTAGTATTGCTAGTATTCTGGGGATT > NC_007793/2740498‑2740691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |