D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,712,483	C→T	A92T (GCT→ACT)	SAUSA300_RS13915 ←	transglycosylase IsaA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,712,483	0	C	T	99.8%	1574.0 / NA	564	A92T (GCT→ACT)	SAUSA300_RS13915	transglycosylase IsaA
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (49/514); minor base A (1/0); total (50/514)
Fisher's exact test for biased strand distribution p-value = 8.87e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 573 total aligned reads displayed.

TTGAGTTACTTGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGCAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATGTCATA  >  NC_007793/2712384‑2712579

  gAGTTACTTGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGATTAGTCTGCACCTGCAACGTTTGAGAAACcagtag                                                                                                <  1:3865935/100‑1 (MQ=255)

      tACTTGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTg                                                                                            <  1:3708097/100‑1 (MQ=255)

         ttGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGAcc                                                                                         <  1:6168139/100‑1 (MQ=255)

         ttGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGAcc                                                                                         <  1:5294893/100‑1 (MQ=255)

          tGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAA‑‑AGTAGTTTGACCAtt                                                                                      <  1:1665505/100‑1 (MQ=255)

           tctcgtgCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAt                                                                                       <  1:163237/96‑1 (MQ=255)

            tctgtgTATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAtg                                                                                      <  1:1315174/98‑2 (MQ=255)

            tctgtgCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAtt                                                                                      <  1:886211/98‑1 (MQ=255)

            tctgtgCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAtt                                                                                      <  1:47775/98‑1 (MQ=255)

            tctgtgCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTGTGACCAtt                                                                                      <  1:6092702/98‑1 (MQ=255)

            aTTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAtt                                                                                      <  1:803854/100‑1 (MQ=255)

            aTTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCCGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAtt                                                                                      <  1:3757706/100‑1 (MQ=255)

             ctgtgTATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCAttg                                                                                     <  1:4336552/99‑2 (MQ=255)

               gtgCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAgc                                                                                   <  1:3623033/100‑1 (MQ=255)

                  cttccgatcTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAgctgg                                                                                <  1:5547004/92‑2 (MQ=255)

                  cATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAgctgg                                                                                <  1:306851/100‑2 (MQ=255)

                  cATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAgcccg                                                                                <  1:3555579/100‑4 (MQ=255)

                   aTTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAgctgct                                                                               <  1:2240376/100‑1 (MQ=255)

                    ttGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCtt                                                                              <  1:1583218/100‑1 (MQ=255)

                    tccgatcTTGCTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCtt                                                                              <  1:2567954/94‑1 (MQ=255)

                        tgCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATa                                                                          >  1:1374004/2‑100 (MQ=255)

                                gATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATg                                                                  >  1:173149/1‑100 (MQ=255)

                                   tGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGAcc                                                               <  1:3106248/100‑1 (MQ=255)

                                   tGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGAcc                                                               <  1:2459297/100‑1 (MQ=255)

                                    gTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCAGAGcacacacgtta                                                              <  1:2060675/100‑11 (MQ=255)

                                     tACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATggggca                                                             <  1:2617213/100‑6 (MQ=255)

                                     tACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCAt                                                             <  1:237258/100‑1 (MQ=255)

                                      aCATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATg                                                            <  1:1031227/100‑1 (MQ=255)

                                       cttttGAACCTTGGTTGTACGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:2879474/98‑1 (MQ=255)

                                       cttccgatctttGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:6578134/90‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCTCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:1190730/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGGTCCATGACCATgt                                                           <  1:6204926/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCGTGACCATgt                                                           <  1:470088/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:4471491/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:5481498/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:5747539/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:3320456/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:6260890/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:2793064/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgt                                                           <  1:6652359/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCCCCATGACCATgt                                                           <  1:2756497/100‑1 (MQ=255)

                                       cATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTACTTCATAGCTCCATGACCATgt                                                           <  1:4128660/100‑1 (MQ=255)

                                       cATTTGAACCTTGGGTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATAACCATgt                                                           <  1:5004889/100‑1 (MQ=255)

                                          ttGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgtagt                                                        <  1:123554/100‑1 (MQ=255)

                                           tGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATgtagta                                                       <  1:4827822/100‑1 (MQ=255)

                                             ttccTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:5938626/98‑1 (MQ=255)

                                             gatcTTGGTTATATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:5240657/97‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCGGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:2710134/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:2288927/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:1508957/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:3945622/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:1406634/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:2935310/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:6420484/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:3184144/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTAcc                                                     <  1:632131/100‑1 (MQ=255)

                                             aaCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCATCATAGCTCCATGACCATGTAGTAcc                                                     <  1:3386117/100‑1 (MQ=255)

                                              aCCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCa                                                    <  1:2111140/100‑1 (MQ=255)

                                               ccTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCACCGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCAt                                                   <  1:4047602/100‑1 (MQ=255)

                                               ccTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCac                                                   <  1:966656/100‑2 (MQ=255)

                                                cTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCAtt                                                  <  1:506054/100‑1 (MQ=255)

                                                cTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCAtc                                                  <  1:1822636/100‑2 (MQ=255)

                                                  tGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCGTAGCTCCATGACCATGTAGTACCATTtg                                                <  1:429018/100‑1 (MQ=255)

                                                  tGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtg                                                <  1:5606054/100‑1 (MQ=255)

                                                  tGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtg                                                <  1:4200436/100‑1 (MQ=255)

                                                  tGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTACTTCATAGCTCCATGACCATGTAGTACCATTtg                                                <  1:836532/100‑1 (MQ=255)

                                                   ggTTGTATGAAGTAGTGTAGTCTGCTCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGTCCATGTAGTACCATTtga                                               <  1:3502965/100‑1 (MQ=255)

                                                   ggTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGGCCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtga                                               <  1:3019475/100‑1 (MQ=255)

                                                   ggTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtga                                               <  1:4911208/100‑1 (MQ=255)

                                                     ttGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaat                                             <  1:145729/100‑2 (MQ=255)

                                                      tGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagt                                            <  1:3661393/100‑1 (MQ=255)

                                                       gTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtg                                           <  1:5133977/100‑1 (MQ=255)

                                                       gTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtg                                           <  1:1115353/100‑1 (MQ=255)

                                                       gTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtg                                           <  1:1934937/100‑1 (MQ=255)

                                                        tATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtga                                          <  1:2824242/100‑1 (MQ=255)

                                                        tATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtat                                          <  1:4946969/100‑3 (MQ=255)

                                                         aTGAAGTAGTGTAGTCTGCACCTGCATCGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtgaa                                         <  1:5679323/100‑1 (MQ=255)

                                                          tGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTtgaagtgaag                                        <  1:2150786/100‑1 (MQ=255)

                                                           gAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTgaagtgaagt                                       <  1:1266330/100‑1 (MQ=255)

                                                            aaGTAGTGTAGTCTGCATCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGtt                                      <  1:2647584/100‑1 (MQ=255)

                                                            aaGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGtt                                      <  1:5449892/100‑1 (MQ=255)

                                                            aaGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGtt                                      <  1:3253198/100‑1 (MQ=255)

                                                            aaGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGtt                                      <  1:1991569/100‑1 (MQ=255)

                                                            aaGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGtt                                      <  1:358601/100‑1 (MQ=255)

                                                                     agtCTGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGaa                             <  1:2507316/100‑1 (MQ=255)

                                                                         tGCACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCa                         <  1:750156/100‑1 (MQ=255)

                                                                           cACCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATc                       <  1:6233605/100‑1 (MQ=255)

                                                                            aCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCt                      <  1:6041122/100‑1 (MQ=255)

                                                                            aCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCt                      <  1:3907236/100‑1 (MQ=255)

                                                                            aCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCt                      <  1:6495315/100‑1 (MQ=255)

                                                                            aCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCAGCt                      <  1:5964202/100‑1 (MQ=255)

                                                                            aCCTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCAGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCt                      <  1:540539/100‑1 (MQ=255)

                                                                             ccTGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCtt                     <  1:4523155/100‑1 (MQ=255)

                                                                               tGCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCtttt                   <  1:4414614/100‑1 (MQ=255)

                                                                                gCAACGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTa                  >  1:590243/1‑100 (MQ=255)

                                                                                  aaCGTTTGAGAAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACa                <  1:1905335/100‑1 (MQ=255)

                                                                                           gaAACCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATg       <  1:4641666/100‑1 (MQ=255)

                                                                                             aaCCAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATGTc     <  1:100161/100‑1 (MQ=255)

                                                                                               ccAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATGTCat   <  1:583561/100‑1 (MQ=255)

                                                                                               ccAGTAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATGTCat   <  1:1701066/100‑1 (MQ=255)

TTGAGTTACTTGATTGTGCATTGTAGCTTACTGATTGTACATTTGAACCTTGGTTGTATGAAGTAGTGTAGTCTGCACCTGCAACGTTTGAGAAACCAGCAGTTTGACCATTAGCTGCTTCATAGCTCCATGACCATGTAGTACCATTTGAAGTGAAGTTATATTGGAAACCATCTTTTACAAAGTGGATGTCATA  >  NC_007793/2712384‑2712579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`