| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,690,352 | A→G | L713L (CTT→CTC) | SAUSA300_RS13825 ← | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,690,352 | 0 | A | G | 100.0% | 39.3 / NA | 17 | L713L (CTT→CTC) | SAUSA300_RS13825 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (1/16); total (1/16) | |||||||||||
TGTTGCACCTTGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCAAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTAAATACCACGAACCTTTTCCAAACAATTTCGTTAATGCAGG > NC_007793/2690256‑2690447 | tgttgCACCTTGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAgg < 1:1725051/100‑2 (MQ=255) gCACCTTGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCAt < 1:334557/100‑1 (MQ=255) gCACCTTGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCAt < 1:3390254/100‑1 (MQ=255) ttGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTcca < 1:3118934/100‑2 (MQ=255) ttGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCt < 1:1517454/100‑1 (MQ=255) taCTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCGTGTCCTT‑AATATCaa < 1:657402/100‑1 (MQ=255) gTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCgg < 1:2627422/100‑2 (MQ=255) tccgatcttCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCa < 1:4182855/92‑1 (MQ=255) tagcTTTAGCTTCAGTTTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATTCtct < 1:3859498/97‑3 (MQ=255) aTCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGt < 1:3796528/100‑1 (MQ=255) aTCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGt < 1:4065704/100‑1 (MQ=255) tCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTa < 1:3991757/100‑1 (MQ=255) cTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTgggct < 1:5329666/100‑4 (MQ=255) ttAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTAAAt > 1:1378283/1‑100 (MQ=255) ttCCTGTGATTCAACCGTTTTATATTTTTCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTAAATACCACGAACCt < 1:3199060/100‑1 (MQ=255) tttATATTTTTCGAGTGCATGTCCTTCAATATCATCTCTTGGAATAATGCGATTCAACCATGCTGGTAACTCCCACGAACCTTTTCCAAACAATTTCGtt < 1:6603195/100‑1 (MQ=255) tttCGAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTAAATACCACGAACCTTTTCCAAACAATTTCGTTAATGCAgg < 1:3865908/100‑1 (MQ=255) | TGTTGCACCTTGTGGATATACTTTAAAGGTTGTGTCGTATGTTTCCTTACTATCTTTAGCTTCAGATTCCTGTGATTCAACCGTTTTATATTTTTCAAGTGCATGTCCTTCAATATCAACTCGTGGAATAATGCGATTCAACCATGCTGGTAAATACCACGAACCTTTTCCAAACAATTTCGTTAATGCAGG > NC_007793/2690256‑2690447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |