D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	480,476	T→C	H466H (CAT→CAC)	SAUSA300_RS02285 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	480,476	0	T	C	100.0%	329.2 / NA	125	H466H (CAT→CAC)	SAUSA300_RS02285	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/4); total (121/4)

Only 100 of 126 total aligned reads displayed.

GACATATCGAAGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACATGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATG  >  NC_007793/480379‑480572

accATATCGAAGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGa                                                                                                >  1:4052032/3‑100 (MQ=255)

         tagcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:2448281/2‑100 (MQ=255)

         cagcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:1242139/2‑100 (MQ=255)

         cagcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:3838039/2‑100 (MQ=255)

         cagcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:72439/2‑100 (MQ=255)

         aggcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:4300122/3‑100 (MQ=255)

         aaGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGTTTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:2446567/1‑100 (MQ=255)

         aaGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGCTTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:2981002/1‑100 (MQ=255)

         aaGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:2676590/1‑100 (MQ=255)

         aaGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:1308909/1‑100 (MQ=255)

         aaGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTAcc                                                                                       >  1:2053714/1‑100 (MQ=255)

          tgtggcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:443588/5‑100 (MQ=255)

          tgcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:48965/2‑100 (MQ=255)

          tgcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:68594/2‑100 (MQ=255)

          ggcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATACCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:1972705/2‑100 (MQ=255)

          agcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:1738181/1‑100 (MQ=255)

          agcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:5827611/1‑100 (MQ=255)

          agcagcAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCt                                                                                      >  1:2590373/1‑100 (MQ=255)

           gcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGCTTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTg                                                                                     >  1:5123530/1‑100 (MQ=255)

           gcagcaGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTg                                                                                     >  1:4373320/1‑100 (MQ=255)

           ccagcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTTAAAAAGATGCCGTAGACGAACAATTCAAACCCGATTCATTACCTg                                                                                     >  1:4911148/2‑100 (MQ=255)

            ctgcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGt                                                                                    >  1:4944118/3‑100 (MQ=255)

            ctgcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGt                                                                                    >  1:4555977/3‑100 (MQ=255)

             agcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTc                                                                                   >  1:4657143/1‑100 (MQ=255)

             acaggggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACAATTCATTACCTGTc                                                                                   >  1:4787775/5‑100 (MQ=255)

              gcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:5083314/1‑100 (MQ=255)

              gcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:4625188/1‑100 (MQ=255)

              gcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:6204088/1‑100 (MQ=255)

              gcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:3669634/1‑100 (MQ=255)

              gcagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:1582375/1‑100 (MQ=255)

              ctcgggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCa                                                                                  >  1:1478770/4‑100 (MQ=255)

               cagGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCAt                                                                                 >  1:2387895/1‑100 (MQ=255)

               atgggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCAt                                                                                 >  1:5602297/3‑100 (MQ=255)

                agGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATg                                                                                >  1:84729/1‑100 (MQ=255)

                agGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATg                                                                                >  1:1994017/1‑100 (MQ=255)

                 tggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATgg                                                                               >  1:3546198/2‑100 (MQ=255)

                 cggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATgg                                                                               >  1:6448847/2‑100 (MQ=255)

                 aggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATgg                                                                               >  1:537879/2‑100 (MQ=255)

                  ggCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGt                                                                              >  1:4548213/1‑100 (MQ=255)

                   ctccTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTa                                                                             >  1:808606/3‑100 (MQ=255)

                   ccccTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTa                                                                             >  1:2693452/2‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:1160447/1‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:4943254/1‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:4953597/1‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:1722472/1‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:6434865/1‑100 (MQ=255)

                        ttGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgcc                                                                        >  1:3922455/1‑100 (MQ=255)

                         tGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgccg                                                                       >  1:3165481/1‑100 (MQ=255)

                         tGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgccg                                                                       >  1:6527052/1‑100 (MQ=255)

                         tGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTAccgccg                                                                       >  1:4045148/1‑100 (MQ=255)

                         tGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTATCATGGTAccgccg                                                                       >  1:4976056/1‑100 (MQ=255)

                          caaaCGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCgg                                                                      >  1:825437/2‑100 (MQ=255)

                           aaaCGATTGGTATTGCAGGTTTTTTTGGATTACTTATTCAAAAAGATGCCGTAGACGAACAATTAAAAAACGATTCATTCCCTGTCATGGTACCGCCGGc                                                                     <  1:2098558/100‑1 (MQ=255)

                                cttGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATc                                                                >  1:1636932/2‑100 (MQ=255)

                                cttGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGCACCGCCGGCAGATc                                                                >  1:2546152/2‑100 (MQ=255)

                                  tGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGc                                                              >  1:3099535/1‑100 (MQ=255)

                                   ggTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCaagatcgg                                                             >  1:1814489/1‑93 (MQ=255)

                                   ggTATTGCAGGCTTCTTTGGATTACCTATTC‑AAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCAt                                                            >  1:5661317/1‑100 (MQ=255)

                                    gTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCAt                                                            >  1:2890094/1‑100 (MQ=255)

                                    gTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCAGATCggaa                                                            >  1:4492947/1‑97 (MQ=255)

                                       ctccAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaa                                                         >  1:1248971/4‑100 (MQ=255)

                                       ctGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaa                                                         >  1:4650411/2‑100 (MQ=255)

                                       ctGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaa                                                         >  1:6204049/2‑100 (MQ=255)

                                        tGCAGGCTTCTTTGGATTACCTATTCAACAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCAGATCggaagagc                                                        >  1:2927980/1‑93 (MQ=255)

                                        tGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaaa                                                        >  1:756468/1‑100 (MQ=255)

                                        cgCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaaa                                                        >  1:4262540/2‑100 (MQ=255)

                                        cacAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTaaa                                                        >  1:3560323/3‑100 (MQ=255)

                                         gCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAg                                                       >  1:5415468/1‑100 (MQ=255)

                                         gCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAg                                                       >  1:2687421/1‑100 (MQ=255)

                                         acAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAg                                                       >  1:4009215/2‑100 (MQ=255)

                                          cAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGa                                                      >  1:1136025/1‑100 (MQ=255)

                                                tcttTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGc                                                >  1:583291/1‑100 (MQ=255)

                                                tcttTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGc                                                <  1:2976595/100‑1 (MQ=255)

                                                tcttTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGc                                                >  1:1133457/1‑100 (MQ=255)

                                                   ttGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGa                                             >  1:4593233/1‑100 (MQ=255)

                                                    tGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGAc                                            >  1:478924/1‑100 (MQ=255)

                                                       ggccccTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGc                                         >  1:5682977/5‑100 (MQ=255)

                                                         tACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTa                                       >  1:3948971/1‑100 (MQ=255)

                                                         tACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTa                                       >  1:3396380/1‑100 (MQ=255)

                                                          aCCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTAc                                      >  1:5507046/1‑100 (MQ=255)

                                                          aCCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTAc                                      >  1:1313554/1‑100 (MQ=255)

                                                          aCCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTAc                                      >  1:6385545/1‑100 (MQ=255)

                                                          aCCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGCACCGCCGGCATATCGCATTAAAGAATTTGCTGACCGCtcc                                      >  1:4557519/1‑98 (MQ=255)

                                                          aCCTATTCAAAAAGACGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGCATTTGCAGACCGCTAc                                      >  1:3479880/1‑100 (MQ=255)

                                                           ccTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGACTTTGCAGATCggaaga                                     >  1:1480750/1‑95 (MQ=255)

                                                           ccTATTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACg                                     >  1:2587753/1‑100 (MQ=255)

                                                              aTTCAAAAAGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCTGCATATCGCATTAAAGAATTTGCAGACCGCTACGata                                  >  1:1992227/1‑100 (MQ=255)

                                                                     aaGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGt                           >  1:2507992/1‑100 (MQ=255)

                                                                      aGATGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGtt                          >  1:5071148/1‑100 (MQ=255)

                                                                       aaTGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGttt                         >  1:1468593/2‑100 (MQ=255)

                                                                        ttGCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTa                        >  1:214793/2‑100 (MQ=255)

                                                                          gCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATc                      >  1:2127057/1‑100 (MQ=255)

                                                                          gCCGTAGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATc                      >  1:1564461/1‑100 (MQ=255)

                                                                              caGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGaca                  >  1:2687321/2‑100 (MQ=255)

                                                                               aGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGacaa                 >  1:4286369/1‑100 (MQ=255)

                                                                               aGACGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGacaa                 >  1:1142798/1‑100 (MQ=255)

                                                                                 ccGAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGacaact               >  1:5262014/2‑99 (MQ=255)

                                                                                   gAACAATTCAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGAcaacagc             >  1:5320778/1‑100 (MQ=255)

                                                                                           cAAACACGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACa     >  1:6219887/1‑100 (MQ=255)

                                                                                              acacGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATg  >  1:3776230/1‑100 (MQ=255)

GACATATCGAAGCAGCAGGGCCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTAGACGAACAATTCAAACATGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAAGAATTTGCAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATG  >  NC_007793/480379‑480572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`