D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	479,868	T→C	Y264H (TAC→CAC)	SAUSA300_RS02285 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	479,868	0	T	C	99.8%	3441.6 / NA	1283	Y264H (TAC→CAC)	SAUSA300_RS02285	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (1266/14); minor base A (2/0); total (1269/14)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1283 total aligned reads displayed.

TCAATAGATCAGGAAGACTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATTACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTGGTGATGAGTTTAAGTCAGTCGCTAAAGA  >  NC_007793/479772‑479962

                gcTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGtt                                                                             >  1:1965904/2‑100 (MQ=255)

                 cTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTa                                                                            >  1:940853/1‑100 (MQ=255)

                 cTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTa                                                                            >  1:6341265/1‑100 (MQ=255)

                 cTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTa                                                                            >  1:1509988/1‑100 (MQ=255)

                   atcAAGCTTATGTTGAAGGACATCTTTTGACGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1684787/3‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGGCATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6446725/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGGCATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1354886/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCGCTTTGAACACCATTTGTTAAc                                                                          >  1:804356/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAGCAACATTTGTTAAc                                                                          >  1:4859953/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGACCAACATTTGTTAAc                                                                          >  1:1930875/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACCACATTTGTTAAc                                                                          >  1:1778777/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACTTTTGTTAAc                                                                          >  1:4379560/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:668156/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3152133/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3390091/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3541359/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3606977/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3871525/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:4214461/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:4431031/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:4515515/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:4655509/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:4704053/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6117579/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5233110/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5386042/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5462554/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6511157/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:3950277/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5525789/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5627684/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5742246/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6392795/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6055010/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2704022/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2602758/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2119812/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2004461/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1733915/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1558685/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2790658/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2547855/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2820464/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1443026/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1259083/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2873311/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:2401710/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:1174187/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGATGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6215815/1‑100 (MQ=255)

                   aCCAAGCTTATGTTGAAGGACATCTTCTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:6009077/1‑100 (MQ=255)

                   aCCAAGCTTATGTCGAAGGACATCTTTTGGCGTTACCGGGCTGGGCAGGTATGTTGTATTACCGTTCACAATAGCATCACTTTGAACAACATTTGTTAAc                                                                          >  1:5145885/1‑100 (MQ=255)

                       aGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGat                                                                      >  1:5565664/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTGTTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:3709957/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:493496/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:5073488/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:3768539/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:3646767/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGattatt                                                                  >  1:3476980/1‑100 (MQ=255)

                           tATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAAAATTTGTTAACGGattatt                                                                  >  1:5016483/1‑100 (MQ=255)

                            aTGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTAttt                                                                 >  1:3114370/1‑100 (MQ=255)

                                tGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCa                                                             >  1:1056381/1‑100 (MQ=255)

                                 gAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCaa                                                            >  1:1630048/1‑100 (MQ=255)

                                 gAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCaa                                                            <  1:402799/100‑1 (MQ=255)

                                  caGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAAt                                                           >  1:3040229/2‑100 (MQ=255)

                                  aaGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAAt                                                           >  1:2672762/1‑100 (MQ=255)

                                      gcATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCgg                                                       >  1:6294380/2‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:869978/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:6586843/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:6554994/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:3217453/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:1118126/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:2076632/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:530690/1‑100 (MQ=255)

                                            tttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:4260586/1‑100 (MQ=255)

                                            gctGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGtt                                                 >  1:2475287/3‑100 (MQ=255)

                                             ttGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTg                                                >  1:6163269/1‑100 (MQ=255)

                                             ctGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTg                                                >  1:2963389/2‑100 (MQ=255)

                                               ggCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAGTTCGGTTAGTTGTc                                              >  1:4793162/1‑100 (MQ=255)

                                               ggCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTc                                              >  1:1390567/1‑100 (MQ=255)

                                               ggCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTc                                              >  1:4162987/1‑100 (MQ=255)

                                                 tattACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGa                                            >  1:5882202/3‑100 (MQ=255)

                                                  tgtACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGaa                                           >  1:1833379/3‑100 (MQ=255)

                                                    tACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACa                                         >  1:4087760/1‑100 (MQ=255)

                                                    tACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACa                                         >  1:1206487/1‑100 (MQ=255)

                                                     tgcGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACaa                                        >  1:3836405/3‑100 (MQ=255)

                                                      ccGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACACCATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGCCGACCAAt                                       >  1:100216/1‑100 (MQ=255)

                                                      ccGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAAt                                       >  1:187518/1‑100 (MQ=255)

                                                      ccGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAAt                                       >  1:4580103/1‑100 (MQ=255)

                                                          tatGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCt                                   >  1:4969634/3‑100 (MQ=255)

                                                          cttGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCt                                   >  1:5962914/2‑100 (MQ=255)

                                                          ctcgggCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCt                                   >  1:2337380/4‑100 (MQ=255)

                                                           ctGGGCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGATTAGTTGTCGAACAATTGCTa                                  >  1:5426297/2‑100 (MQ=255)

                                                             gggCAGGTATGTTGTATTACCGTTCGCAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGt                                >  1:218542/1‑100 (MQ=255)

                                                             gggCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGt                                >  1:732586/1‑100 (MQ=255)

                                                             gggCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGt                                >  1:226006/1‑100 (MQ=255)

                                                             gggCAGGTATGTTGAATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGt                                >  1:5790540/1‑100 (MQ=255)

                                                               gCAGGTATGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTg                              >  1:5693698/1‑100 (MQ=255)

                                                                     aTGTTGTATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTGGtgatg                        <  1:326854/100‑1 (MQ=255)

                                                                         tgtATTACCGTTCACAACAGCATCACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTGGTGATGAGtt                    >  1:3330354/1‑100 (MQ=255)

                                                                                 cGTTCACAACAGCATCACTTTGAGCAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTGGTGATGAGTTTAagtcag            >  1:4326871/1‑100 (MQ=255)

TCAATAGATCAGGAAGACTACCAAGCTTATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCACAACAGCATTACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTCGAACAATTGCTAGTTGGTGATGAGTTTAAGTCAGTCGCTAAAGA  >  NC_007793/479772‑479962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`