Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,608,681	T→C	R59R (CGT→CGC)	SAUSA300_RS13420 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,608,681	0	T	C	100.0%	251.0 / NA	100	R59R (CGT→CGC)	SAUSA300_RS13420	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/59);  total (41/59)

TATAGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGTGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAGGGCAAGTTACATC  >  NC_007793/2608586‑2608776                                                                                                |                                                                                                cataGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCt                                                                                             >  1:3165251/2‑100 (MQ=255)  ataGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtt                                                                                            >  1:5836171/1‑100 (MQ=255)  ataGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtt                                                                                            >  1:2044860/1‑100 (MQ=255)   ctgCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCttt                                                                                           >  1:1165325/3‑100 (MQ=255)    tgCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtttt                                                                                          >  1:1959590/2‑100 (MQ=255)    aGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtttt                                                                                          >  1:1034576/1‑100 (MQ=255)    aGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtttt                                                                                          >  1:5813147/1‑100 (MQ=255)    aGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCtttt                                                                                          >  1:4807707/1‑100 (MQ=255)     gCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTa                                                                                         >  1:179389/1‑100 (MQ=255)      cAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAg                                                                                        >  1:3629100/1‑100 (MQ=255)               tAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTcc                                                                               <  1:4016984/100‑1 (MQ=255)               tAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTcc                                                                               <  1:2585302/100‑1 (MQ=255)               tAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTcc                                                                               <  1:2410785/100‑1 (MQ=255)               tAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTcc                                                                               <  1:5295834/100‑1 (MQ=255)                    ttttATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAggga                                                                          <  1:4015032/100‑4 (MQ=255)                      ttATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtg                                                                        <  1:5507645/100‑1 (MQ=255)                       gctcttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgt                                                                       <  1:5282920/91‑1 (MQ=255)                       gctcttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgt                                                                       <  1:24148/91‑1 (MQ=255)                        ctcttccgaTCTTGTTGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtggg                                                                      <  1:2206946/92‑3 (MQ=255)                        ctcttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgtg                                                                      <  1:3945829/92‑1 (MQ=255)                        ctcttccgaTCTCGTGGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgtg                                                                      <  1:1890116/92‑1 (MQ=255)                        atatGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgtg                                                                      <  1:1522032/100‑1 (MQ=255)                         tcttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgg                                                                     <  1:6578537/93‑1 (MQ=255)                         tcttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgg                                                                     <  1:6182564/93‑1 (MQ=255)                         tatGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTtgtag                                                                     <  1:4775816/100‑3 (MQ=255)                          cttccgaTCTTGTGGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggg                                                                    <  1:4218109/94‑1 (MQ=255)                          cttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggg                                                                    <  1:494865/94‑1 (MQ=255)                          ccgatcttCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggg                                                                    <  1:1258173/93‑1 (MQ=255)                          atGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggg                                                                    <  1:80504/100‑1 (MQ=255)                          atGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGAGTTGTggg                                                                    <  1:312224/100‑1 (MQ=255)                           ttccgaTCTTGTGGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:5420537/95‑1 (MQ=255)                           ttccgaTCTTGTAGTTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCTCATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGCgggg                                                                   <  1:5873144/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAGAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:2416313/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:5932365/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:3010176/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:5826745/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:6120459/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:6147949/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:2027402/95‑1 (MQ=255)                           ttccgaTCTTGTAGGTAATCGATTTAAAAATGATATAAGTGTGCCTAAGGCCGCATCCAAGATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggt                                                                   <  1:518010/95‑2 (MQ=255)                           ttccgaTCTTGT‑GGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggggt                                                                  <  1:5719310/95‑2 (MQ=255)                           ttccgaTCTTGAAGGTAATCGTTTTAAAAATAATATATGTATGGCTACAGCCTCTTCCAATATAGGACGCGGCGTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:5962041/95‑1 (MQ=255)                           tGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:1145976/100‑1 (MQ=255)                           tGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:3469751/100‑1 (MQ=255)                           tGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:5706177/100‑1 (MQ=255)                           tGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:3730962/100‑1 (MQ=255)                           tGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTaggg                                                                   <  1:2739072/100‑1 (MQ=255)                           cttccgatctGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggg                                                                   <  1:123248/91‑1 (MQ=255)                            tccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggggg                                                                  <  1:2394187/96‑2 (MQ=255)                            tccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggggc                                                                  <  1:3364982/96‑2 (MQ=255)                            tccgaTCTCGTATGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggtt                                                                  <  1:3002316/96‑3 (MQ=255)                            gTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTggggt                                                                  <  1:5849508/100‑2 (MQ=255)                            gTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGa                                                                  >  1:5589667/1‑100 (MQ=255)                            gTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTCGTGgaga                                                                  >  1:1042019/1‑100 (MQ=255)                             cgatctttGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggggc                                                                 <  1:19337/94‑3 (MQ=255)                             ccgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGaa                                                                 <  1:2549802/97‑2 (MQ=255)                              cgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggggga                                                                <  1:2866999/98‑4 (MQ=255)                              cgaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGt                                                                <  1:212819/98‑1 (MQ=255)                              aaaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggggcc                                                                <  1:1253675/100‑4 (MQ=255)                               gaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGtt                                                               <  1:2516585/99‑1 (MQ=255)                               gaTCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTACAGATTTGTGGGGaaca                                                               <  1:1351366/99‑4 (MQ=255)                               atctgtGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGtt                                                               <  1:5968649/95‑1 (MQ=255)                                   ttGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAggg                                                           >  1:850740/1‑100 (MQ=255)                                   ttGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAggg                                                           >  1:4626460/1‑100 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCCATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTG‑GGGGAgatcggaag                                                         >  1:6007393/1‑92 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCACTATAGGTCGCGGTTTTTAGTATCGTTCCAGCTTTGTGGGGAgatcggaa                                                          >  1:4383714/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTATTATCGTTCCAGATTTGTCGGGAgatcggaa                                                          >  1:4677870/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCCGATTTGTGGGGAgatcggaa                                                          >  1:5018959/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggggagatcgga                                                          >  1:3907037/1‑91 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTgggagatcggaag                                                          >  1:878862/1‑90 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGgagatcggaaga                                                          >  1:5670345/1‑92 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGgagatcggaaga                                                          >  1:926990/1‑92 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:1282771/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:2907350/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:6069164/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:6551988/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:3959675/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:2152881/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:1430712/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaa                                                          >  1:863200/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGt                                                          <  1:2510783/100‑1 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGGGGGGAgatcggaa                                                          >  1:479304/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGCGGGGAgatcggaa                                                          >  1:2088544/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTATGGGGAgatcggaa                                                          >  1:2522304/1‑93 (MQ=255)                                    tGTAGGTAATCGTTTTAAAAATAATATAAGTACGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGt                                                          >  1:3921711/1‑100 (MQ=255)                                     gTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGtt                                                         >  1:710141/1‑100 (MQ=255)                                      tAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGttt                                                        <  1:651925/100‑1 (MQ=255)                                       aGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAgatcggaagag                                                       >  1:4324681/1‑90 (MQ=255)                                       aGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGttca                                                       <  1:758607/100‑3 (MQ=255)                                                  ttAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAg                                            <  1:1018617/100‑1 (MQ=255)                                                   tAAAAATAATATAAGTATGACGAAAGCCACATCCAATATAGGACGCGGCTTTTAGCATCGTTCCAGATTTGTGGGGAGGTAGGGTTTACTTAATTAAAgg                                           >  1:5166825/1‑100 (MQ=255)                                                      aaaTAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGt                                        <  1:5763519/100‑1 (MQ=255)                                                      aaaTAATATAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGt                                        <  1:5690717/100‑1 (MQ=255)                                                         taataTAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCtt                                     <  1:5279236/100‑2 (MQ=255)                                                         taataTAAGTATGACTAAAGCCACATCCAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTg                                     <  1:4509660/100‑1 (MQ=255)                                                         taataTAAGTATGACTAAAGCCACATCCAAGATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTg                                     <  1:5476465/100‑1 (MQ=255)                                                                                 actcAATATAGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAggg             >  1:5389508/4‑100 (MQ=255)                                                                                          aGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAGGGCAAGTTACa    >  1:3546704/1‑100 (MQ=255)                                                                                          aGGACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAGGGCAAGTTACa    >  1:4138000/1‑100 (MQ=255)                                                                                            gACGCGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAGGGCAAGTTACatc  >  1:2962695/1‑100 (MQ=255)                                                                                                |                                                                                                TATAGCAGACATGATAGAATTTTATATGTAAATCTTGTAGGTAATCGTTTTAAAAATAATATAAGTATGACTAAAGCCACATCCAATATAGGACGTGGCTTTTAGTATCGTTCCAGATTTGTGGGGAGTTAGGGTTTACTTAATTAAAGGGGTCTGCCCTCAATTGCTCACCAACGAGGGCAAGTTACATC  >  NC_007793/2608586‑2608776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑