| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,530,526 | A→T | V25D (GTT→GAT) | SAUSA300_RS12990 ← | prevent‑host‑death protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,530,526 | 0 | A | T | 99.2% | 359.9 / NA | 132 | V25D (GTT→GAT) | SAUSA300_RS12990 | prevent‑host‑death protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (2/129); total (2/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TTCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAACACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAACACA > NC_007793/2530430‑2530622 | ttCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAtcac < 1:5202761/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACGGTTACCATATCACt < 1:608446/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt < 1:1155661/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt < 1:481324/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt < 1:4692052/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt < 1:4238866/100‑1 (MQ=255) tCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACt < 1:2732351/100‑1 (MQ=255) tGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTat < 1:314280/100‑1 (MQ=255) tGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTat < 1:2056223/100‑1 (MQ=255) gTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatc < 1:6653315/100‑1 (MQ=255) gTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatc < 1:5896739/100‑1 (MQ=255) gTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatc > 1:415982/1‑100 (MQ=255) ttGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatct < 1:4500632/100‑2 (MQ=255) ttGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTatca < 1:2820967/100‑1 (MQ=255) ttccgatcttGGAGCTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACttttac < 1:4446655/95‑3 (MQ=255) tCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCa < 1:933488/100‑1 (MQ=255) tccgatcttcgTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt < 1:5878780/90‑1 (MQ=255) cgatcttGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt < 1:4405617/98‑1 (MQ=255) ccATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt < 1:6590407/100‑1 (MQ=255) ccATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt < 1:6519434/100‑1 (MQ=255) atctcatTGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCAt < 1:5220711/97‑1 (MQ=255) gatcttGGAATTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:924333/99‑1 (MQ=255) cgatctGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:2461892/95‑1 (MQ=255) catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:5130952/100‑1 (MQ=255) catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:3106915/100‑1 (MQ=255) catcatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:2185023/100‑1 (MQ=255) catcatGGAATTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:338227/100‑1 (MQ=255) atctatGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:3225561/96‑1 (MQ=255) atctatGGAATTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATa < 1:275837/96‑1 (MQ=255) ttGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTg > 1:1995354/2‑100 (MQ=255) ccgAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGc < 1:1794180/98‑1 (MQ=255) ggAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCCGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcc < 1:1251173/100‑1 (MQ=255) ggAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcc < 1:2099438/100‑1 (MQ=255) gAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGcca < 1:4058145/100‑2 (MQ=255) ggTTATATTCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtt < 1:2035724/99‑1 (MQ=255) agatataATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTAACGTCATTTACTTTTGTCATAAGTGCCtt < 1:1428754/97‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCTTCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:3946805/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGccaag < 1:348167/100‑4 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:6184721/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:1978514/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:52450/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:1424483/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:2862296/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCttt < 1:2265555/100‑1 (MQ=255) gTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCtta < 1:3035246/100‑2 (MQ=255) ttATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTa < 1:5591533/100‑1 (MQ=255) ttATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTa < 1:6282039/100‑1 (MQ=255) cataATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTat < 1:6605295/99‑2 (MQ=255) tCTGATTCTGACATGATTACTACG‑TTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTg < 1:4066087/100‑1 (MQ=255) tGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTgc < 1:3845732/100‑2 (MQ=255) tGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTga < 1:3810334/100‑2 (MQ=255) gATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTggc < 1:4413657/100‑3 (MQ=255) gATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTc < 1:2584400/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATTTTACAGTTCCCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTATAAATTCTGTCg < 1:2709346/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:4510527/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:4651099/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:2244201/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:2289127/100‑1 (MQ=255) aTTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGCTGCCATATCACTATCATCATTTACTGTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:6527686/100‑1 (MQ=255) aTTCCGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCg < 1:3830806/100‑1 (MQ=255) tCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAg < 1:4549127/100‑1 (MQ=255) cTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGaaa < 1:5356888/100‑3 (MQ=255) tGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAggt < 1:4515595/100‑3 (MQ=255) tGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAggg < 1:2830437/100‑3 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTTGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTGTAAATTCTGTCGAGCGt < 1:6647954/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTTTCGAGCGt < 1:5310046/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCgggggc < 1:6101696/100‑6 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:1203826/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:494432/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:1586128/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:182317/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:2523765/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:2660837/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:2760547/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:2942211/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:3361297/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:3657846/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:4218564/100‑1 (MQ=255) gACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATGCTGTCGAGCGt < 1:6279165/100‑1 (MQ=255) gACATGATTACTACGTTTTTAACATCAGTAGATGTTACAGTTACCAGATCACTATCAACATTTACTTTTGTCATAAGTGCCTTTAAATTCAGTCGAGCGt < 1:646596/100‑1 (MQ=255) gACATGATCACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGt < 1:6448922/100‑1 (MQ=255) aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa < 1:5727342/100‑1 (MQ=255) aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa < 1:4697140/100‑1 (MQ=255) aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa < 1:4052551/100‑1 (MQ=255) aCATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTa < 1:3673782/100‑1 (MQ=255) cATGATTACTGCGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTag < 1:6464258/100‑2 (MQ=255) cATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGacgggtt < 1:3604054/100‑7 (MQ=255) cATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTac < 1:1731936/100‑2 (MQ=255) cATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTAt < 1:6072896/100‑1 (MQ=255) aTGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTTCCAGATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTagg < 1:3885252/100‑3 (MQ=255) aTGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAACTTCTGTCGAGCGTagg < 1:1611560/100‑3 (MQ=255) aTGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTagt < 1:1502740/100‑3 (MQ=255) catcaGTAGATGTTGCAGTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCat < 1:4964380/100‑1 (MQ=255) gTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCtttt < 1:211520/100‑1 (MQ=255) gTTACCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCtttt < 1:5833805/100‑1 (MQ=255) aCCATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGcctcctccctgt < 1:6041131/100‑7 (MQ=255) cATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacac < 1:6081060/100‑1 (MQ=255) cATATCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacac < 1:1437330/100‑1 (MQ=255) atatCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacaca < 1:540275/100‑1 (MQ=255) atatCACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAacaca < 1:1972676/100‑1 (MQ=255) | TTCTGTTGGAGGTAAAGTGTTTCCATCATGGAGTTATAATCTGATTCTGACATGATTACTACGTTTTTATCATCAGTAGATGTTACAGTTACCATAACACTATCATCATTTACTTTTGTCATAAGTGCCTTTAAATTCTGTCGAGCGTATGAATAATTTTTAATAATCATATTTATCGCCTCCTTTTAACACA > NC_007793/2530430‑2530622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |