| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,388,589 | C→T | intergenic (‑22/‑104) | SAUSA300_RS12240 ← / → SAUSA300_RS12245 | transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,388,589 | 0 | C | T | 100.0% | 24.3 / NA | 11 | intergenic (‑22/‑104) | SAUSA300_RS12240/SAUSA300_RS12245 | transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (0/11); total (0/11) | |||||||||||
TTGTTTTTAACCAGTGCTTTAACTGACTTAACTCCCTTTCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTCTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGCATTTTATCTATTACAAATATTAAATTGCTGG > NC_007793/2388495‑2388685 | ttgttTTTAACCAGTGCTTTAACTGACTTAACTCCCTTTCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTtttctt < 1:1671151/100‑1 (MQ=255) aaCCAGTGCTTTAATTGACTTAACTCCCTTTCTGCTTCTATAAAGCGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGtta < 1:4985536/100‑2 (MQ=255) aGTGCTTTAACTGACTTAACTCCCTTTCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTaa < 1:5348848/100‑1 (MQ=255) cttccgatCTGCTTCTACAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAAtt < 1:6183958/93‑1 (MQ=255) ccTTTCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACagggcat < 1:6200242/100‑7 (MQ=255) cttccgatctCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACtt < 1:5456566/91‑1 (MQ=255) cttCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACttt < 1:5988296/99‑2 (MQ=255) aaaCGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATtatataa < 1:5383848/100‑2 (MQ=255) aCGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCa < 1:710573/100‑1 (MQ=255) tCATAATATGATGCCTCCTATGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGTATTTTATCt < 1:2362911/100‑1 (MQ=255) cttccgatctcctGTGTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGTATTTTATCTATTACa < 1:5976693/92‑1 (MQ=255) gTTTTTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGTATTTTATCTATTACAAATATTAAATTGCTg < 1:5643135/100‑1 (MQ=255) ttttttCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGTATTTTATCTATTACAAATATTAAATTGCTgg < 1:3321081/100‑1 (MQ=255) | TTGTTTTTAACCAGTGCTTTAACTGACTTAACTCCCTTTCTGCTTCTATAAAACGTTGAACTTTATTACTCATAATATGATGCCTCCTATGTTTCTTCTTAGATGTTTGTAATTCATATTATTATACAATTACTTAAATTTATTATATATCAAACTTAGCATTTTATCTATTACAAATATTAAATTGCTGG > NC_007793/2388495‑2388685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |