Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007793 2,313,223 T→C L239L (TTA→TTG)  SAUSA300_RS11775 ← siderophore synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077932,313,2230TC99.5% 1814.5 / NA 641L239L (TTA→TTG) SAUSA300_RS11775siderophore synthetase
Reads supporting (aligned to +/- strand):  ref base T (0/3);  new base C (14/622);  total (14/627)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 641 total aligned reads displayed.

TTTTTTAGCAATCCATGCTTCAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAA‑CCTAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACACAACA  >  NC_007793/2313127‑2313319
                                                                                                 |                                                                                                
 tttttAGCAATCCATGCTTCAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAA‑CCCAAAc                                                                                              <  1:4117626/100‑1 (MQ=255)
                                                                        cttccgatCTTCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAcca                       <  1:6483472/93‑1 (MQ=255)
                                                                         ttccgatCTTCGCCTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccat                      <  1:3024482/94‑1 (MQ=255)
                                                                         ctATAGTCTTCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATGTCATCAATAATAAATTGATCATTAccag                      <  1:1204210/100‑2 (MQ=255)
                                                                             gatCTTTACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:2178854/98‑1 (MQ=255)
                                                                             gatCTTCGTTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:2873391/98‑1 (MQ=255)
                                                                             gatCTTCATTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:6120473/98‑1 (MQ=255)
                                                                             gatCTTCACTCTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:5835579/98‑1 (MQ=255)
                                                                             gatCTTCACTCTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCAACAATAATAAATTGATCATTAccatccat                  <  1:4620577/98‑1 (MQ=255)
                                                                             gatCTTCACGTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:1308145/98‑1 (MQ=255)
                                                                              ctCTTCACTTTTCAAACCCAAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccat                  <  1:5117627/99‑1 (MQ=255)
                                                                               tCTTCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccatccacac                <  1:3178983/100‑4 (MQ=255)
                                                                               tCTTCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAg                <  1:2833369/100‑1 (MQ=255)
                                                                                ctacACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGc               <  1:4758118/97‑1 (MQ=255)
                                                                                ccgatcTTTTCTAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGc               <  1:5794282/95‑1 (MQ=255)
                                                                                 ttCACTTTTCAAA‑CTCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGAAATTATTTCATCAATAATAAATTGATCATTGCCATCCATAGCt              <  1:4986579/100‑1 (MQ=255)
                                                                                 ttCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGTATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCt              <  1:3929842/100‑1 (MQ=255)
                                                                                 ttCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCt              <  1:1876202/100‑1 (MQ=255)
                                                                                 ttCACCTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCt              <  1:2719987/100‑1 (MQ=255)
                                                                                 tctatttttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCt              <  1:3118493/95‑1 (MQ=255)
                                                                                  ttccTTTTCAAA‑CCCAAACTCTTTAGAACCACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:253578/97‑1 (MQ=255)
                                                                                  ttaCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAgatc             >  1:2935069/3‑97 (MQ=255)
                                                                                  tCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTAccacccagatcgg             >  1:5504373/1‑94 (MQ=255)
                                                                                  tCACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:3414358/100‑1 (MQ=255)
                                                                                  tCACGTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGcca             <  1:5407056/100‑3 (MQ=255)
                                                                                  tCACCTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:2317402/100‑1 (MQ=255)
                                                                                  tCACCTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:2024696/100‑1 (MQ=255)
                                                                                  tCACATTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:5033196/100‑1 (MQ=255)
                                                                                  atctttttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtg             <  1:2966291/96‑1 (MQ=255)
                                                                                   ttccgatctaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:890398/91‑1 (MQ=255)
                                                                                   tccgatctgga‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:1003796/90‑1 (MQ=255)
                                                                                   taCTCTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTCCCATCCATAGCtgt            <  1:5887953/99‑1 (MQ=255)
                                                                                   gaCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATATTAAATTGATCATTACCATCCATAGCtgt            <  1:3986463/99‑1 (MQ=255)
                                                                                   cgctcttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:486256/95‑1 (MQ=255)
                                                                                   cacaTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:4351543/100‑1 (MQ=255)
                                                                                   cACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTGCCATCCATAGCtgt            <  1:696179/100‑1 (MQ=255)
                                                                                   cACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:2786689/100‑1 (MQ=255)
                                                                                   cACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:2625089/100‑1 (MQ=255)
                                                                                   cACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:2069681/100‑1 (MQ=255)
                                                                                   cACTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgg            <  1:4921275/100‑2 (MQ=255)
                                                                                   cACTCTTCAAA‑CCCAAACTCTTTAAAAACACTCGGATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTGCCATCCATAGCtgt            <  1:4596346/100‑1 (MQ=255)
                                                                                   cACTCTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:3058562/100‑1 (MQ=255)
                                                                                   cACTATTCAAA‑CCCAAACTCTTTAAAAACACACGAAACTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:3155740/100‑1 (MQ=255)
                                                                                   cACCTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:2463669/100‑1 (MQ=255)
                                                                                   atcTTTTCATA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgc            <  1:789662/98‑2 (MQ=255)
                                                                                   atcTTTTCAGA‑CCCAAACTCTTTAAAAACACACGAGTCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:5931844/98‑1 (MQ=255)
                                                                                   aaCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgt            <  1:1789919/99‑1 (MQ=255)
                                                                                    tccgatctaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgag           <  1:5477575/92‑3 (MQ=255)
                                                                                    tcTTTTCACA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg           <  1:3827443/99‑1 (MQ=255)
                                                                                    gcTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtc           <  1:2130747/99‑2 (MQ=255)
                                                                                    gcTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtc           <  1:159619/99‑2 (MQ=255)
                                                                                    acctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg           <  1:3271095/97‑1 (MQ=255)
                                                                                    acctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgta           <  1:6207217/97‑2 (MQ=255)
                                                                                    aCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtg           <  1:820837/100‑1 (MQ=255)
                                                                                    aCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgta           <  1:526818/100‑2 (MQ=255)
                                                                                    aCTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgag           <  1:3507368/100‑3 (MQ=255)
                                                                                     gatctCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtgg          <  1:4164149/96‑2 (MQ=255)
                                                                                     gatctCAAA‑CCCAAACTCTTTAAAAACACACGAAGCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:6056415/96‑1 (MQ=255)
                                                                                     cctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGTATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:3443529/98‑1 (MQ=255)
                                                                                     cctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtgt          <  1:3784577/98‑2 (MQ=255)
                                                                                     ccgatctga‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:36117/92‑1 (MQ=255)
                                                                                     ccgatctaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:6606183/93‑1 (MQ=255)
                                                                                     cccttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:2243415/97‑1 (MQ=255)
                                                                                     cTTTTCAAT‑CCCAAACACTTTAAACACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:1045918/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgttg          <  1:3481941/100‑3 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtga          <  1:1108035/100‑2 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:6274365/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:3375584/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:4038373/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:3564090/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑CCAAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:5204231/100‑1 (MQ=255)
                                                                                     cTTTTCAAA‑ACCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGc          <  1:4834156/100‑1 (MQ=255)
                                                                                      ttttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca         <  1:6361213/100‑1 (MQ=255)
                                                                                      ttttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGAAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCtgtcta         <  1:174597/100‑4 (MQ=255)
                                                                                      ctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca         <  1:1517306/99‑1 (MQ=255)
                                                                                      ctttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGca         <  1:5982179/99‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcag        <  1:4717485/100‑2 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:1660965/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:421195/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:4424613/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:452430/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:2593341/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:2492789/100‑1 (MQ=255)
                                                                                       tttCAAA‑CCCAAACCCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:4879757/100‑1 (MQ=255)
                                                                                       tatCATA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGccg        <  1:4285354/98‑3 (MQ=255)
                                                                                       cttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcac        <  1:5660055/99‑1 (MQ=255)
                                                                                       atcttaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcag        <  1:1416758/95‑2 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcact       <  1:1933792/100‑2 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca       <  1:2666397/100‑1 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca       <  1:6312363/100‑1 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca       <  1:6236735/100‑1 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca       <  1:3332743/100‑1 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaca       <  1:5353991/100‑1 (MQ=255)
                                                                                        ttCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCAGCAATAATAAATTGATCATTACCATCCATAGCTGTGcaga       <  1:5634957/100‑3 (MQ=255)
                                                                                        atctaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcaga       <  1:920605/96‑3 (MQ=255)
                                                                                         tCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacat      <  1:5557488/100‑2 (MQ=255)
                                                                                         tCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacac      <  1:6425330/100‑1 (MQ=255)
                                                                                         tCAAA‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacac      <  1:6563311/100‑1 (MQ=255)
                                                                                           aaa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGcacacgg    <  1:3676166/100‑3 (MQ=255)
                                                                                            aa‑CCCAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACacaac   <  1:2384033/100‑1 (MQ=255)
                                                                                                 |                                                                                                
TTTTTTAGCAATCCATGCTTCAAAATATTTCCCTATCGTATGATCATATTGCCAAGGATGTACTAAAATCGCTCTATAGTCTTCACTTTTCAAA‑CCTAAACTCTTTAAAAACACACGAATCTGATTGTAGTATTCGGGAATTATTTCATCAATAATAAATTGATCATTACCATCCATAGCTGTGCACACAACA  >  NC_007793/2313127‑2313319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑