D3A :: BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_007793	2,264,201	G→A	A184T (GCA→ACA)	SAUSA300_RS11565 →	lytic regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_007793	2,264,201	0	G	A	99.4%	887.0 / NA	325	A184T (GCA→ACA)	SAUSA300_RS11565	lytic regulatory protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (314/8); minor base T (2/0); total (317/8)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 326 total aligned reads displayed.

AATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCAACTAACGATAAAGTAAAAACACACTTAGCTAATG  >  NC_007793/2264105‑2264297

           ctcatcaTATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCACAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTgg                                                                                    >  1:105883/2‑100 (MQ=255)

               gggtatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAt                                                                                >  1:6631239/4‑100 (MQ=255)

                tatatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:2932178/2‑100 (MQ=255)

                gctatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1465473/3‑100 (MQ=255)

                cttatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:3591764/3‑100 (MQ=255)

                catATGCAGATAGTACACGCCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1591873/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTACAACAATTATTACTTGGTTAtt                                                                               >  1:4985417/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:3367243/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:3292217/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:440597/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:3677838/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:3846190/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:2871676/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:2805568/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:2646045/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:546510/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:2444053/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:594715/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:5968559/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:6130328/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:734011/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1248146/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1278131/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:6408914/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:6370287/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1745819/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:6188871/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:1866059/1‑100 (MQ=255)

                catATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTAtt                                                                               >  1:5997313/1‑100 (MQ=255)

                 ttatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTgggagatc                                                                              >  1:1768276/2‑94 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:5202530/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:4144374/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:3960389/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:4307038/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:1372928/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:5029347/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:1140310/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:6288537/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:5421671/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:26830/1‑100 (MQ=255)

                  tatGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCACTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGt                                                                             >  1:3253098/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACCACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:2585548/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:884316/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:4018965/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:5873768/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:6567514/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:5507705/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:540047/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:2051610/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:3519737/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:2959645/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:332483/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:1979638/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:3283437/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:1936028/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:1668184/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTACTGtt                                                                            >  1:4892129/1‑100 (MQ=255)

                   atGCAGATAGTACACACCTGATTGGAATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGtt                                                                            >  1:6244894/1‑100 (MQ=255)

                       tgATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATa                                                                        >  1:3747444/2‑100 (MQ=255)

                          tAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCt                                                                     >  1:1114862/1‑100 (MQ=255)

                           tgTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTa                                                                    >  1:6505035/2‑100 (MQ=255)

                           aGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTa                                                                    >  1:5767272/1‑100 (MQ=255)

                           aGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTa                                                                    >  1:2157969/1‑100 (MQ=255)

                           aGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTa                                                                    >  1:3094240/1‑100 (MQ=255)

                           aGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTa                                                                    >  1:3541412/1‑100 (MQ=255)

                             tACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTATTACCTAtt                                                                  >  1:2129183/1‑100 (MQ=255)

                             gacacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAtt                                                                  >  1:5331850/2‑100 (MQ=255)

                             cacacacCTGATTGGTATTGCTATTACACCTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAtt                                                                  >  1:1170397/2‑100 (MQ=255)

                              tcacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:5099671/2‑100 (MQ=255)

                              gcacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:4501278/2‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATACTCATTGTTGTTTTCTTGATTAAACCCATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:2183679/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:821571/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:5255291/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:4108786/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:3074526/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:4703934/1‑100 (MQ=255)

                              acacacCTGATTGGTATTGCTATTACAACTCAAAGCATCACAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTAttt                                                                 >  1:2315737/1‑100 (MQ=255)

                                acacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTc                                                               >  1:3184461/1‑100 (MQ=255)

                                acacCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTc                                                               >  1:4582666/1‑100 (MQ=255)

                                  cccTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCaa                                                             >  1:4478137/2‑100 (MQ=255)

                                  acCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCaa                                                             >  1:2737763/1‑100 (MQ=255)

                                   ccTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAAc                                                            >  1:4366322/1‑100 (MQ=255)

                                   ccTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAAc                                                            >  1:1324188/1‑100 (MQ=255)

                                      gATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACttt                                                         >  1:2508823/1‑100 (MQ=255)

                                      gATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACttt                                                         >  1:517442/1‑100 (MQ=255)

                                      gATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACttt                                                         >  1:1967544/1‑100 (MQ=255)

                                      gATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTACTACTTGGTTATTGTTAATACCTATTTTCAACttt                                                         >  1:4769413/1‑100 (MQ=255)

                                                    ttACAACTCAAAGCATCTTAATCATTGTTGTTTTTTTGATTAAATCAATTATTACTTGGTTATTGTTAATACTTATTTTCAACTTTATGACTTGTTTCGt                                           >  1:6441723/1‑100 (MQ=255)

                                                     tACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTCTGACTAGTTTCGtt                                          >  1:4943553/1‑100 (MQ=255)

                                                        caCTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGaa                                       >  1:70724/2‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:1617595/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:3627804/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:4190430/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:4292109/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:668395/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:4626805/1‑100 (MQ=255)

                                                            cAAAGCATCATAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCaa                                   >  1:5586660/1‑100 (MQ=255)

                                                                    catAATCATTGTTGTTTTATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCAACTAACGAt                           >  1:2479599/1‑100 (MQ=255)

                                                                                     tATTGATTAAAACAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCAACTAACGATAAAGTAAAAacaccagg          <  1:1347662/100‑5 (MQ=255)

                                                                                        tGATTAAAACAATTATTACTTGGTTATTGTTAATGCCTATTTTCAACTTTATGACTAGTTTCGTTGAATCAACTAACGGTAAAGTAAAAACACACTTAGc       <  1:5733638/100‑1 (MQ=255)

AATTCAGTACAATCATCATATGCAGATAGTACACACCTGATTGGTATTGCTATTACAACTCAAAGCATCATAATCATTGTTGTTTTATTGATTAAAGCAATTATTACTTGGTTATTGTTAATACCTATTTTCAACTTTATGACTAGTTTCGTTGAATCAACTAACGATAAAGTAAAAACACACTTAGCTAATG  >  NC_007793/2264105‑2264297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`