| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_007793 | 2,262,064 | C→T | intergenic (‑132/‑20) | SAUSA300_RS11550 ← / → SAUSA300_RS11555 | oxidoreductase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_007793 | 2,262,064 | 0 | C | T | 100.0% | 17.3 / NA | 8 | intergenic (‑132/‑20) | SAUSA300_RS11550/SAUSA300_RS11555 | oxidoreductase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/3); total (5/3) | |||||||||||
ATACCACTTTATGAGATATGTAAAACTTGTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCACATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAGGCGATTA > NC_007793/2261967‑2262160 | ctACCACTTTATGTGATATGTAAAACTTGTTACAACTATAAAACTCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCatat > 1:4096040/2‑100 (MQ=255) gTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACa < 1:6081894/100‑1 (MQ=255) tACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAat > 1:540642/1‑100 (MQ=255) actactGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACAtt < 1:5818911/100‑1 (MQ=255) actactGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACAtt < 1:6476680/100‑1 (MQ=255) ctgctGGGAACGTATTAAATTAATATATGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTa > 1:3992348/4‑100 (MQ=255) atGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGc > 1:4546151/1‑100 (MQ=255) tGAACAAATATTCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCa > 1:3122408/1‑100 (MQ=255) tCATATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAGGCGATTa > 1:4053547/1‑100 (MQ=255) | ATACCACTTTATGAGATATGTAAAACTTGTTACAACTATAAAAATCAATTGACATACTACTGGGAACGTATTAAATTAATATATGAACAAATATTCACATGAAAGGATTGTCATATAATGTCAGAACAATATTCAGAAATAAATACAGATACATTAGAACGCGTAACTGAAATTTTCAAGGCATTAGGCGATTA > NC_007793/2261967‑2262160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |